病毒集成通过扰乱DNA/染色体和ECM相关的功能基因的表达来促进SV40T诱导的不朽化
Zihang Li1, Tun Xu2, Xiujuan Li3
1Genome Institute, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China.
Gene
|December 4, 2023
概括
猿人病毒40大T抗原 (SV40T) lentivirus有助于细胞不朽化. 病毒集成可以通过改变DNA/染色体和细胞外基因表达来促进这种情况.
科学领域:
- 分子生物学分子生物学
- 基因组学就是基因组学.
- 细胞生物学 细胞生物学
背景情况:
- 携带猿类病毒40大T抗原 (SV40T) 的lentivirus通常用于细胞不朽化.
- 在这个过程中病毒DNA整合的具体作用仍在争论中.
研究的目的:
- 研究病毒整合对SV40T介导的初级小鼠胚胎纤维细胞 (MEFs) 不朽化的影响.
- 为了识别基因表达变化和与永生期间的病毒整合相关的调节网络.
主要方法:
- 使用了RNA测序 (RNA-seq) 和全基因组测序 (WGS).
- 进行了基因调节网络 (GRN) 分析.
主要成果:
- 在不朽化过程中,差异表达基因 (DGE) 在病毒感染途径中得到丰富.
- 在不朽化和衰老细胞之间改变的基因显示了DNA/染色体和细胞外矩阵 (ECM) 活动的丰富.
- 发现32个差异表达的基因在它们的编码或调节区域中具有病毒集成.
- 鉴定出p53和STAT1是基因调节网络中的关键调节因子.
结论:
- 病毒整合可能会增强SV40T介导的细胞不朽化.
- 这种增强可能是由于病毒集成破坏了DNA/染色体和ECM相关基因表达.
相关概念视频
Mechanisms of Retrovirus-induced Cancers
5.1K
Retroviruses are RNA viruses that have been shown to cause cancers in diverse species, including chickens, mice, cats, and monkeys. The RNA genomes of these viruses are first reverse-transcribed into single and then double-stranded DNA (dsDNA) copies. This dsDNA called proviral DNA then integrates into the host genome. Subsequently, the host cell transcribes the proviral DNA in concert with the chromosomal DNA. This leads to the production of viral RNA and proteins that assemble at the host...
5.1K
Rous Sarcoma Virus (RSV) and Cancer
5.1K
Rous Sarcoma virus or RSV was discovered by F. Peyton Rous in the year 1911 as a filterable transmissible agent that could cause tumors in chickens. He won a Nobel Prize for this discovery in 1966. His experiments clearly demonstrated that some cancers could be caused by infectious agents and led to the discovery of many more cancer-causing viruses in animals as well as humans.
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
5.1K
Retroviruses
12.3K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.3K
Somatic to iPS Cell Reprogramming
2.2K
Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012...
2.2K
Induced Pluripotent Stem Cells
4.1K
Stem cells are undifferentiated cells that divide and produce different cell types. Ordinarily, cells that have differentiated into a specific cell type are terminally differentiated; however, scientists have found a way to reprogram these mature cells so that they dedifferentiate and return to an unspecialized, proliferative state. These cells are pluripotent like embryonic stem cells—able to produce all cell types—and are called induced pluripotent stem cells (iPSCs).
Somatic...
Somatic...
4.1K
Retrovirus Life Cycles
46.0K
Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
46.0K


