对环境和生命史的基因组观控制了微生物获取策略的控制
Linta Reji1,2, Romain Darnajoux1, Xinning Zhang1,2
1Department of Geosciences, Princeton University, Princeton, New Jersey, USA.
Environmental microbiology reports
|December 6, 2023
概括
微生物使用各种策略来获得 (N),其中低能量的氨吸收是最常见的. 能源供应和环境因素显著影响不同微生物群体中哪些N获取途径普遍存在.
科学领域:
- 微生物学 微生物学
- 基因组学就是基因组学.
- 生物地质化学生物地质化学
背景情况:
- 微生物需要 (N) 才能生存,利用不同的环境获取策略.
- 控制这些N获取策略的分布的生态和生理因素尚不清楚.
研究的目的:
- 研究10种主要微生物获取策略在多种微生物基因组中的分布.
- 确定影响这些策略普及的关键控制,包括能源成本和环境因素.
主要方法:
- 从地球微生物组的基因组目录中分析微生物基因组.
- 利用基因基因基因方法将N获取策略与微生物生命史特征联系起来.
- 评估了与不同同化途径相关的能源成本.
主要成果:
- 能源成本是N获取战略分配的主要决定因素;低成本的氨和氨基酸吸收是最常见的,而能源密集的生物固是最不常见的.
- 空气性化学有机和氧光比无氧微生物拥有显著更多的N获取策略,突出显示了能量可用性的作用.
- 与宿主相关的微生物相比,无机N的同化策略富含自由活的微生物,这表明了环境控制.
结论:
- 微生物获取策略是由能量约束,能源可用性和环境因素的组合所塑造的.
- 物理限制,如途径不兼容性,增加了观察到的分布的复杂性.
- 改进的时空环境元数据对于推进微生物基因组数据的机械和预测分析至关重要.
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