新出现的猪肠道病毒G感染,流行病学,完整基因组测序,进化和风险因素分析在印度
Sudipta Bhat1, Mohd Ikram Ansari2, Jobin Jose Kattoor3
1Division of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly 243122, India.
Virology
|December 14, 2023
概括
这项研究分析了印度猪中的G肠病毒 (EV-G),发现G6基因型占主导地位. 印度EV-G菌株与其他亚洲分离物有遗传联系,并有重组的证据.
科学领域:
- 兽医病毒学 兽医病毒学
- 分子流行病学分子流行病学
- 猪和猪病 猪和猪疾病
背景情况:
- 肠道病毒G (EV-G) 是全球猪群中的新兴病原体.
- 了解EV-G的遗传多样性和演变对于控制猪的疾病至关重要.
研究的目的:
- 对印度猪的EV-G流行病学,风险因素和分子特征进行深入分析.
- 确定印度EV-G分离物的遗传多样性,进化关系和重组模式.
主要方法:
- 完整的EV-G基因组的遗传学分析.
- 使用SimPlot和选择压力分析进行重组检测.
- 来自534个印度猪便样本的EV-G分离物的分子特征.
主要成果:
- 11.61%的猪样本检测出EV-G.阳性.
- 最常见的是G6基因型,印度菌株也与G1,G8和G9基因型聚集在一起.
- 印度的EV-G菌株与越南和中国的分离物具有最高的核酸相似性,并确定了一种重组菌株.
结论:
- 这项研究为印度EV-G的流行病学和遗传多样性提供了全面的见解.
- 这些发现突显了印度EV-G菌株的进化动态和重组潜力.
- 结果有助于了解南亚的EV-G流通和演变.
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