通过SCF泛素化酶对透性C-降解体进行孤儿质量控制
Ka-Yiu Edwin Kong1, Susmitha Shankar2, Frank Rühle2
1Institute of Molecular Biology (IMB), Mainz, Germany. k.kong@imb-mainz.de.
Nature communications
|December 15, 2023
概括
研究人员探索了酵母中的C-降解子,确定了5000多个潜在的降解子. 这种SCF-Das1泛基因酶通路准了其中的许多,揭示了蛋白质降解和蛋白质稳定中的广泛特异性.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 细胞生物学 细胞生物学
背景情况:
- 选择性蛋白质降解对细胞功能至关重要.
- 渐变,简短的线性图案,介导基质识别降解.
- 虽然N-降解子得到了很好的研究,但C-降解子在真核生物中仍然不太了解.
研究的目的:
- 为了全面了解真核细胞的C-降解路径.
- 为了进行对发芽酵母中C-降解子的公正调查.
- 阐明C-degron识别的机制和范围.
主要方法:
- 随机库和酵母C终端组的稳定性分析.
- 机器学习,高通量突变发生和遗传选.
- 对全长蛋白质基质进行选.
主要成果:
- 在芽酵母中识别了超过5000个潜在的C-降解子.
- 该SCF-Das1无素结合酶向约40%的已识别的降解蛋白.
- Das1是一种乱交的F-box蛋白质,可以识别多种C-degron图案.
- SCF-Das1与孤儿蛋白质复合体子单元的降解有关.
结论:
- 这项研究突出了真核生物中C-降解通路的多样性.
- 具有广泛特异性的SCF/C-degron通路对蛋白质稳定有显著的贡献.
- 揭示了在C端蛋白质降解的新机制.
更多相关视频
相关概念视频
Regulated Protein Degradation
7.3K
It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
7.3K
Anaphase Promoting Complex
2.9K
The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
2.9K
Export of Misfolded Proteins out of the ER
3.6K
After folding, the ER assesses the quality of secretory and membrane proteins. The correctly folded proteins are cleared by the calnexin cycle for transport to their final destination, while misfolded proteins are held back in the ER lumen. The ER chaperones attempt to unfold and refold the misfolded proteins but sometimes fail to achieve the correct native conformation. Such terminally misfolded proteins are then exported to the cytosol by ER-associated degradation or ERAD pathway for...
3.6K
Protein Complexes with Interchangeable Parts
2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K
The Proteasome
850
Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
850
The Unfolded Protein Response
4.6K
The ER is the hub of protein synthesis in a cell. It has robust systems to quality control protein folding and also for degradation of terminally misfolded proteins. Under normal conditions, a small proportion of misfolded proteins that cannot be salvaged need to be transported to the cytoplasm by the ER-associated degradation or ERAD pathways. However, if the ERAD cannot handle the misfolded proteins, the cell activates the unfolded protein response or UPR to adjust the protein folding...
4.6K


