在互补的富G和富C线程中的结构转变以及它们在不同pH条件下的混合
Milena Kh Badalyan1, Ishkhan V Vardanyan1, Samvel G Haroutiunian1
1Department of Molecular Physics, Yerevan State University, Yerevan 0025, Armenia.
ACS omega
|December 18, 2023
概括
人类端粒DNA链 (TelG和TelC) 喜欢双重形态. 在较低的pH (5.5) 时,TelC形成一个i-motif结构,在中性pH时增加双重稳定性.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 人类端粒DNA序列容易形成非正规结构.
- 富含G和富含C的端粒DNA链可以相互作用形成特定的形状.
- pH影响DNA的结构转变和稳定性.
研究的目的:
- 研究人类端粒DNA链 (TelG和TelC) 的等等质混合物中的pH依赖结构转换.
- 分析 TelG,TelC 和它们在不同 pH 值上的混合物的化热力学.
- 阐明端粒DNA复合体和i-motifs的构造偏好和稳定性.
主要方法:
- 循环二重化 (CD) 光谱法用于监测结构变化.
- 紫外光谱光度计用于热变性研究.
- 差分扫描热度计 (DSC) 用于确定融热力学.
主要成果:
- 泰尔G:TelC混合物的首选构造是DNA复杂.
- 在pH值为5.5时,由TelC形成的i-motif结构的显著群体与双重体共存.
- 将pH值从5.5提高到7.0会降低i-motif的融度,从而提高双重稳定性.
结论:
- 双重和i-motif形式之间的结构平衡是pH-依赖的.
- 在酸性pH下,TelC的i-motif形成有助于结构复杂性.
- 由于i-motif的贡献减少,TelG:TelC重复的稳定性在中性pH下得到增强.
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