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相关概念视频

Improving Translational Accuracy02:07

Improving Translational Accuracy

10.8K
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
10.8K
Types of Genetic Transfer Between Organisms02:18

Types of Genetic Transfer Between Organisms

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Genetic transfer occurs when genetic information is passed from one organism to another. It occurs via two mechanisms: vertical gene transfer and horizontal gene transfer. Vertical gene transfer occurs when genetic information is transferred from one generation to the next, which happens much more frequently than horizontal gene transfer. Both sexual and asexual reproduction are forms of vertical gene transfer, where one or more organisms pass some or all of their genome onto their progeny.
27.9K
Combinatorial Gene Control02:33

Combinatorial Gene Control

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Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
8.3K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

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The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
915
Cooperative Binding of Transcription Regulators02:13

Cooperative Binding of Transcription Regulators

6.4K
Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome.  Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form...
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Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

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相关实验视频

Updated: Jul 7, 2025

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
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基因调控网络:通过转移学习改进推理.

Marcelo Tigre Moura1

  • 1Departamento de Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal da Paraíba (UFPB), João Pessoa, Brasil.

Cellular reprogramming
|December 22, 2023
PubMed
概括

深度转移学习增强了人类细胞中的基因调节网络推断. 这种方法可以识别疾病基因和潜在的心脏病药物标.

科学领域:

  • 基因组学就是基因组学.
  • 计算生物学 计算生物学
  • 系统生物学 系统生物学

背景情况:

  • 基因调节网络 (GRNs) 对于细胞功能和发育至关重要.
  • 从高通量数据推断GRN在计算上具有挑战性.
  • 人类心脏病涉及复杂的遗传和网络失调.

研究的目的:

  • 应用深度转移学习来改进GRN推理.
  • 识别与人类疾病相关的基因.
  • 发现心脏病的基于网络的治疗点.

主要方法:

  • 使用深度转移学习模型.
  • 应用模型对人类细胞数据.
  • 综合网络分析用于目标识别.

主要成果:

  • 在GRN推理中获得了更高的准确性.
  • 成功识别了与疾病相关的新型基因.
  • 在心脏病网络中发现了潜在的可用药物点.

结论:

  • 深度转移学习是GRN分析的强大工具.
关键词:
深度学习是一种深度学习.基因网络 基因网络机器学习是机器学习.一个单细胞RNA-seqq.转录网络是一种转录网络.

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  • 这种方法有助于发现疾病机制和治疗策略.
  • 这些发现为治疗人类心脏病提供了新的途径.