相关实验视频
Updated: Jul 7, 2025

09:17
3D Printing of Biomolecular Models for Research and Pedagogy
Published on: March 13, 2017
23.8K
聚合物建模揭示了染色体DNA物理性质与基于凝聚素的染色体循环的大小和分布之间的相互作用
Daniel Kolbin1, Benjamin L Walker2, Caitlin Hult3
1Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Genes
|December 23, 2023
概括
DNA循环大小和染色质组织是由染色质刚性,SMC复合体刚性和结合强度控制的. 这些因素协同调节拓领域内的循环大小分布和压缩体积.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 生物物理学的生物物理.
背景情况:
- 由于热运动和SMC复合体 (染色体的结构维护),如凝聚素和凝聚素,短暂的DNA环在全基因组内形成.
- SMC复合体通过交联和循环挤出,通过细胞类型和条件的特异性影响更高阶染色体组织.
研究的目的:
- 调查调控DNA循环大小及其沿色素分布的调控机制.
- 了解染色质聚合物的特性和SMC复合物的活性如何决定循环形成和基因组组织.
主要方法:
- 利用珠弹聚合物链模型来模拟色素动态.
- 在聚合物模型中纳入了SMC复合物的活性.
主要成果:
- 确定了三个关键因素:染色质聚合物刚性,SMC复合拉伸刚性和结强度.
- 证明这些因素共同决定循环大小分布和染色体域紧缩体积.
- 表明DNA结合强度决定了凝聚素或染色质刚性主要调节循环大小.
结论:
- 连接强度在拓领域内决定色素构成方面发挥着至关重要的,意想不到的作用.
- 染色质刚性,SMC复杂性质和结合之间的相互作用为理解基因组组织提供了一个框架.
相关概念视频
Chromatin Packaging
15.4K
Each human somatic cell contains 6 billion base-pairs of DNA. Each base-pair is 0.34 nm long, which means that each diploid cell contains a staggering 2 meters of DNA. How is such a long DNA strand packed inside a nucleus measuring only 10 - 20 microns in diameter?
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order...
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order...
15.4K
Condensins
3.5K
Condensins are large protein complexes that use ATP to fuel the assembly of chromosomes during mitosis. They transform the tangled, shapeless mass of post-interphase DNA into individualized chromosomes by compacting, organizing, and segregating chromosomal DNA.
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
3.5K
Duplication of Chromatin Structure
5.5K
The process of chromosome duplication during cell division requires genome-wide disruption and re-assembly of chromatin. The chromatin structure must be accurately inherited, reassembled, and maintained in the daughter cells to ensure lineage propagation.
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
5.5K
Nucleosome Remodeling
9.1K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
9.1K
Lampbrush Chromosomes
7.9K
In 1882, Flemming observed lampbrush chromosomes (LBC) in salamander eggs. Later in 1892, Rückert observed LBCs in shark egg cells and coined the term "lampbrush chromosomes" because they looked like brushes used to clean kerosene lamps.
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
7.9K
Polytene Chromosomes
10.0K
Polytene chromosomes are giant interphase chromosomes with several DNA strands placed side by side. They were discovered in the year 1881 by Balbiani in salivary glands, intestine, muscles, malpighian tubules, and hypoderm of larvae Chironomus plumosus. Hence, these are also called "Salivary gland chromosomes." These are found in insects of the order Diptera and Collembola; in certain organs of mammals; and synergids, antipodes of flowering plants. Polytene chromosomes are also...
10.0K

