主酶促进转录和复制在同一模板链上的竞争,导致DNA损伤
Weifeng Zhang1,2, Zhuo Yang1,2, Wenjie Wang1,2
1Center for Plant Biology, School of Life Sciences, Tsinghua University, 100084, Beijing, China.
Nature communications
|January 3, 2024
概括
主酶活动通过影响复制速度促进转录复制冲突 (TRC) 和DNA损伤. 抑制原酶或DNA聚合酶可以挽救由头部TRC (HO-TRC) 引起的基因组不稳定性.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 植物科学 植物科学
背景情况:
- 转录复制冲突 (TRCs),特别是Head-On TRCs (HO-TRCs),可以导致R循环和DNA损伤,但这些机制仍然不明朗.
- 一种质细胞局部化的RNase H1蛋白,AtRNH1C,此前已被鉴定为其在去除R循环和解决HO-TRC以保持基因组完整性方面的作用.
研究的目的:
- 阐明HO-TRCs的潜在机制及其对基因组稳定性的影响.
- 研究质细胞局部化原酶 (ATH) 和DNA聚合酶 (Pol1A) 在TRC和DNA损伤中的作用.
主要方法:
- 突变发生屏幕用于识别影响质细胞局部化原酶 (ATH) 的突变.
- 对野生类型和突变植物的发育表型的分析.
- 链特异性DNA损伤测序用于绘制DNA损伤部位的地图.
- 过度表达ATH的研究和Pol1A.的突变分析.
主要成果:
- 确定了ATH的突变,削弱了DNA模板结合和减少RNA原始合成/传递,这减缓了复制并挽救了atrnh1c突变者的发育缺陷.
- 在转录单元末端的滞后链上,HO-TRCs会导致DNA损伤;ATH过度表达会加剧HO-TRCs和DNA损伤.
- 塑体DNA聚合酶Pol1A的突变也挽救了在atrnh1c突变体中观察到的缺陷.
结论:
- 叶绿体灵酶活性通过影响复制动力学来促进HO-TRC和基因组不稳定性.
- 通过原酶或DNA聚合酶突变减缓DNA复制,可以减轻HO-TRC诱导的DNA损伤和发育缺陷.
- 这些发现表明,通过TRCs,原酶活性有助于基因组不稳定.
更多相关视频
08:53Strand-Specific Analysis of Proteins at Replicating DNA Strands by Enrichment and Sequencing of Protein-Associated Nascent DNA Method
Published on: May 2, 2025
364
06:25Quantifying Replication Stress in Ovarian Cancer Cells Using Single-Stranded DNA Immunofluorescence
Published on: February 10, 2023
2.1K
相关概念视频
Translesion DNA Polymerases
10.0K
Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
10.0K
Homologous Recombination
50.6K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.6K
Proofreading
6.3K
Synthesis of new DNA molecules is carried out by the enzyme DNA polymerase, which adds nucleotides on the daughter strand complementary to the template DNA strand. DNA polymerase has a higher affinity to add the correct base and ensures fidelity during DNA replication. Furthermore, it exhibits proofreading activity during replication, using an exonuclease domain that cuts off incorrect nucleotides from the nascent DNA strand.
Errors During Replication are Corrected by the DNA Polymerase...
Errors During Replication are Corrected by the DNA Polymerase...
6.3K
Restarting Stalled Replication Forks
5.8K
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.8K
The Replisome
33.5K
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
33.5K
Genome Copying Errors
4.2K
DNA replication is a well-evolved process that copies millions of base pairs with high fidelity during each cell division. Occasionally a wrong base or a long stretch of wrong bases may get added to the daughter strands. If the errors are left unchecked, cells might accumulate several mutations that might endanger their survival. Therefore, the copying errors are checked and repaired at three levels.
4.2K
