在乙蛋白化酶1中,一个保留但结构分离的循环调节了其催化活性,联体结合和折叠稳定性
William Trey Harris1, Isabelle Altieri1, Isabella Gieck1
1Department of Chemistry and Biochemistry, Butler University, Indianapolis, Indiana, USA.
Proteins
|January 5, 2024
概括
人类乙蛋白雌激酶 (APT) 调节蛋白质膜的定. 人类APT1中的保存循环对于其催化活性,连接物结合和稳定性至关重要,特定的残留物起着关键作用.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 人类乙蛋白雌激酶 (APT) 是一种酶,可以从S-乙化蛋白中去除棕酸盐,控制膜结合.
- 细菌APT同类体中活性部位附近的灵活循环会影响酶构造,但尽管有序列保存,但其在人类APT中的作用尚不清楚.
研究的目的:
- 研究人类APT1 (hAPT1) 中保存循环的功能,调节其催化活性,带结合和蛋白质折叠.
- 为了确定这个循环中的特定残留物,这些残留物对hAPT1的功能和稳定性至关重要.
主要方法:
- 在hAPT1循环中替代关键氨基酸残留的局部定向突变发生.
- 动力测试用于测量催化活性.
- 结构和生物物理特征,包括连接物结合亲和和和蛋白质稳定性测量.
主要成果:
- 尽管与细菌同类相比,hAPT1的保存循环通过影响连接体结合和基质定位来调节催化活动,尽管其结构位置发生了变化.
- 发现特定残留物 (Pro69,Phe72,Asp73,Ile74,Ile75) 对基质选择性,催化和稳定具有重要作用.
- 素71 (Trp71) 对于hAPT1的结构和功能至关重要,其替代导致活动丧失,稳定性降低,并降低了连接体亲和力.
结论:
- 在hAPT1中的分离循环在酶调节,基质相互作用和整体蛋白质稳定性中起着关键作用.
- Trp71代表了α/β水解酶中一种新型的必需酸盐类,以及人类APT中的潜在基位.
相关概念视频
Conserved Binding Sites
4.2K
Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
4.2K
Covalently Linked Protein Regulators
6.8K
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
These groups modify specific amino acids in a protein....
6.8K
Protein Folding
118.2K
Overview
118.2K
Ligand Binding and Linkage
4.8K
Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked. In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
4.8K
Cooperative Allosteric Transitions
7.9K
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
7.9K
ATP Synthase: Structure
12.4K
ATP synthase or ATPase is among the most conserved proteins found in bacteria, mammals, and plants. This enzyme can catalyze a forward reaction in response to the electrochemical gradient, producing ATP from ADP and inorganic phosphate. ATP synthase can also work in a reverse direction by hydrolyzing ATP and generating an electrochemical gradient. Different forms of ATP synthases have evolved special features to meet the specific demands of the cell. Based on their specific feature, ATP...
12.4K


