检测 lncRNA-蛋白相互作用的协议在体外通过tRSA RNA拉下测定检测 lncRNA-蛋白相互作用的协议
Liyun Jiang1, Jun Yang1, Reqing He1
1Key Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, Jiangxi 330031, China.
STAR protocols
|January 6, 2024
概括
这项研究引入了一种新的体外检测方法,用于检测长非编码RNA (lncRNA) 和RNA结合蛋白 (RBP) 之间的相互作用. 该协议有助于识别 lncRNAs 的新型蛋白质合作伙伴,这对细胞调节至关重要.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 生物化学 生物化学
背景情况:
- 长非编码RNAs (lncRNAs) 是细胞功能的关键调节者.
- RNA结合蛋白 (RBPs) 与 lncRNAs 相互作用,以调节这些调节作用.
- 了解lncRNA-RBP相互作用对于破译复杂的细胞过程至关重要.
研究的目的:
- 提出一种用于检测 lncRNA-RBP 相互作用的新体外协议.
- 提供一种选RNA相互作用蛋白质的方法.
- 为了促进与特定的lncRNAs相关的新型RBP的识别.
主要方法:
- 开发一个tRNA脚手架,用于拉下测试.
- 为体外研究准备蛋白质和lncRNA转录.
- 使用体外结合试验和西部斑分析来检测相互作用.
主要成果:
- 该协议能够成功地在体外检测lncRNA-RBP相互作用.
- 该方法适用于从细胞溶解物中选RNA相互作用蛋白.
- 它为随后的质谱分析奠定了基础,以确定新的RBP.
结论:
- 本方案为研究 lncRNA-RBP 相互作用提供了一种可靠的方法.
- 这种技术可以在分子生物学研究中广泛应用于RBP查.
- 进一步的应用可能会导致发现涉及lncRNA和蛋白质的新调节网络.
相关概念视频
Nucleic acids
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes, the...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes, the...
Nucleic Acids
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes, the...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes, the...
lncRNA - Long Non-coding RNAs
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
lncRNA - Long Non-coding RNAs
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...


