非添加物遗传成分对全人口基因表达变异有显著的贡献
Andreas Tsouris1, Gauthier Brach1, Joseph Schacherer2
1Université de Strasbourg, CNRS, GMGM UMR, 7156 Strasbourg, France.
Cell genomics
|January 8, 2024
概括
基因表达变异主要是由遥远的调节变化 (转变效应) 而不是局部变化 (cis效应) 驱动的. 这些转变效应缓冲转录组上的遗传影响.
科学领域:
- 遗传学 遗传学是一种遗传学.
- 分子生物学分子生物学
- 系统生物学 系统生物学
背景情况:
- 基因表达变异将基因型与表型联系起来.
- 当地 (cis) 和远程 (trans) 调节变化都会影响基因表达.
- 对于cis和trans调节对表达变化的差异影响尚未完全理解.
研究的目的:
- 研究 cis 和 trans 调控元件对基因表达变异的相对贡献.
- 为了分析转录组的遗传缓冲.
主要方法:
- 从不同的Saccharomyces cerevisiae分离物中对323种独特杂交物的转录组分析.
- 对5,087个转录丰度特征的分析.
- 在父-杂交三组中对等基因特异性读数的比较.
主要成果:
- 非添加的遗传成分解释了36%的平均基因表达变异.
- 跨调节性变化是基因表达变异的主要驱动因素.
- 调节性差异的变化往往是由跨效应调节的.
- 转录组表现出全球遗传缓冲,主要是由于跨调节变异.
结论:
- 跨调节变异在塑造基因表达多样性方面发挥着主导作用.
- 基因缓冲机制,在很大程度上通过跨效应调解,稳定基因表达模式.
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