在ABO内部RUNX1结合部位的新型调节变异诱导A3表型
Gian Andri Thun1, Morgan Gueuning1, Sonja Sigurdardottir2
1Department of Research and Development, Blood Transfusion Service Zurich, Swiss Red Cross, Schlieren, Switzerland.
Vox sanguinis
|January 16, 2024
概括
使用纳米孔测序发现了ABO基因的新型调节变异,解释了罕见的A3B血型. 这一发现推动了对神秘的ABO表型的理解,并突出了序列的测序.
科学领域:
- 遗传学和基因组学 遗传学和基因组学
- 血型血清学 血型血清学
- 分子诊断学 分子诊断
背景情况:
- 在 ABO 血型 (A3,B3) 中的混合场聚合可能是由于合体或罕见的 ABO 基因变异造成的.
- 解决这些复杂的病例需要高分辨率测序来分析全基因单基因类型.
研究的目的:
- 为了研究一种罕见的A3B血型的遗传基础,该血型呈现混合场凝结.
- 评估长读测序对高分辨率 ABO 基因分析的有用性.
主要方法:
- 整个ABO基因测序使用牛津纳米孔技术的长读测序.
- 通过两个重叠的远程PCR片段对 ABO 基因进行放大.
- 使用桑格测序对捐赠者和家庭成员样本进行确认分析.
主要成果:
- 鉴定了一种新型异质合体g.10924C>A变异在ABO*A等位基因内的一种内突1 RUNX1转录因子结合位.
- 证明该变异从捐赠者的母亲继承,捐赠者的母亲也表现出抗A特异性混合场聚合.
结论:
- 在ABO基因的RUNX1动机中发现了一种新的调节变异,它有助于A3/B3表型.
- 长距离PCR与纳米孔测序相结合,是解决神秘ABO表型的强大策略.
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