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相关概念视频

Genome Annotation and Assembly03:36

Genome Annotation and Assembly

18.9K
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
18.9K
Carbohydrate Metabolism01:36

Carbohydrate Metabolism

11.1K
Carbohydrates are polymers composed of molecules containing atoms of carbon, hydrogen and oxygen. One gram of carbohydrate can provide four kilo-calories of energy, which makes it the most efficient instant energy source.
Starch accounts for approximately 60% of the carbohydrates consumed by humans. Since amylase enzymes cannot function in the stomach's acidic environment, starch can only be digested in the mouth and small intestine. Simple sugars are found naturally in milk and fruits in...
11.1K

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相关实验视频

Updated: Jul 5, 2025

Metagenomic Analysis of Silage
08:43

Metagenomic Analysis of Silage

Published on: January 13, 2017

18.3K

在微生物组中使用dbCANAN进行碳水化合物活性酶注释.

Jinfang Zheng, Le Huang, Haidong Yi

    bioRxiv : the preprint server for biology
    |January 23, 2024
    PubMed
    概括
    此摘要是机器生成的。

    本协议详细说明了在微生物组数据中使用独立的run_dbcan软件对碳水化合物活性酶 (CAZymes) 的自动注释. 它为研究人员提供安全,可扩展的分析,从预处理到可视化.

    科学领域:

    • 微生物学和生物信息学
    • 酶学和基因组学 酶学和基因组学

    更多相关视频

    High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits
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    High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits

    Published on: September 20, 2016

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    Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota
    13:35

    Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota

    Published on: May 23, 2025

    367

    相关实验视频

    Last Updated: Jul 5, 2025

    Metagenomic Analysis of Silage
    08:43

    Metagenomic Analysis of Silage

    Published on: January 13, 2017

    18.3K
    High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits
    06:51

    High-throughput Screening of Carbohydrate-degrading Enzymes Using Novel Insoluble Chromogenic Substrate Assay Kits

    Published on: September 20, 2016

    13.0K
    Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota
    13:35

    Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota

    Published on: May 23, 2025

    367

    背景情况:

    • 碳水化合物活性酶 (CAZymes) 对肠道健康,生物质降解和碳循环至关重要.
    • 自动化的CAZyme注释对于分析复杂的微生物群数据集至关重要.
    • 现有的Web服务器在数据隐私和大规模分析的可扩展性方面存在限制.

    结论:

    • 该协议促进了对多个样本中的CAZyme,CGC和基质丰度的出版质量数据可视化.
    • 它使微生物组研究人员能够在本地服务器上执行快速,安全和可扩展的CAZyme注释.
    • 该协议需要熟悉Linux命令行,但没有编程经验.