整个基因组重新排序揭示了大白猪中后轴性多肢的候选基因
Yongle Hao1, Yunlei Song1, Fei Chen1
1Laboratory Animal Engineering Research Center of Ganzhou, Gannan Medical University, Jiangxi, China.
Animal genetics
|January 29, 2024
概括
遗传分析确定LMBR1是大白猪中后轴多样性的候选基因. 这一发现突显了ZRS调控元件在多达克提利亚病变发生过程中的作用.
科学领域:
- 动物遗传学动物遗传学
- 兽医科学 兽医科学 兽医科学
- 发展生物学 发展生物学
背景情况:
- 多爪是一种常见的猪先天性异常,影响动物福利和经济生存能力.
- 之前对猪多节节症的遗传研究在识别致病基因方面取得了有限的进展.
研究的目的:
- 为了研究大白猪中后轴多样性的遗传基础.
- 为了识别与多肢性相关的候选基因和基因组区域.
主要方法:
- 全基因组关联研究 (GWAS) 和基因差异化分析,对29例多节节病例和79例对照进行了分析.
- 使用了高深度和低深度的全基因组测序数据.
- 识别显著相关的单核酸多态 (SNP) 和候选区域.
主要成果:
- 确定了48个显著相关的SNP和27个候选地区.
- 在染色体18 (Chr18: 1.850-1.925 Mb) 上确定了一个关键的信任区域.
- 这个区域包括LMBR1基因的第五个内核,其中包含Sonic Hedgehog (SHH) 调控元件ZRS.
结论:
- 建议LMBR1基因,特别是其ZRS调节元件,作为猪中后轴多样性的强有力的候选基因.
- 了解ZRS在LMBR1中的作用对于阐明多节节的病原性至关重要.
- 这项研究为未来的遗传研究和潜在的育种策略提供了基础.
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