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相关概念视频

Lysogenic Cycle of Bacteriophages00:43

Lysogenic Cycle of Bacteriophages

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In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...
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Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

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Lytic Cycle of Bacteriophages01:30

Lytic Cycle of Bacteriophages

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Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the...
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Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

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Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
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Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

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While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
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Eukaryotic Evolution01:24

Eukaryotic Evolution

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The endosymbiont theory is the most widely accepted theory of eukaryotic evolution; however, its progression is still somewhat debated. According to the nucleus-first hypothesis, the ancestral prokaryote first evolved a membrane to enclose DNA and form the nucleus. Conversely, the mitochondria-first hypothesis suggests that the nucleus was formed after endosymbiosis of mitochondria.
Contrary to the endosymbiont theory, the eukaryote-first hypothesis proposes that the simpler prokaryotic and...
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相关实验视频

Updated: Jul 4, 2025

Author Spotlight: Advancing Protein Engineering – Harnessing Evolution Through PRANCE and Lab Automation
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Author Spotlight: Advancing Protein Engineering – Harnessing Evolution Through PRANCE and Lab Automation

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一本关于菌体和机器人辅助近连续进化的实用指南.

Samir Aoudjane1, Stefan Golas2, Osaid Ather1

  • 1The Francis Crick Institute.

Journal of visualized experiments : JoVE
|January 29, 2024
PubMed
概括

机器人加速进化加速了使用反控制的实验. 本指南详细介绍了通过菌体和机器人辅助的近连续进化 (PRANCE) 的设置,以实现可靠的高通量分子进化.

科学领域:

  • 分子生物学分子生物学
  • 生物技术是生物技术.
  • 机器人工程 机器人工程 机器人工程

背景情况:

  • 机器人加速进化提高了实验的可靠性和速度.
  • 反控制是改善蛋白质和生物体进化结果的关键.

研究的目的:

  • 为建立菌体和机器人辅助近连续进化 (PRANCE) 提供全面指南.
  • 详细说明实施PRANCE系统的硬件和软件要求.
  • 为验证一个新的PRANCE系统提供初始的实验协议.

主要方法:

  • 描述硬件设置:液体处理仪器,盘子阅读器,,加热器和3D打印容器.
  • 使用基于Python的开源软件配置液体处理机器人.
  • 概述初步实验,以验证PRANCE系统的能力.

主要成果:

  • 普兰斯 (PRANCE) 能够同时进行独立的反控制进化实验.
  • 该指南促进了复杂的机器人加速进化系统的设置.
  • 成功的验证实验证实了系统为多重演变做好了准备.

结论:

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  • 法国为高通量分子进化提供了一个强大的平台.
  • 这本指南是研究人员建立机器人加速进化的关键手册.
  • 描述的设置使蛋白质和生物体的可靠和加速进化成为可能.