组织特异性和cis-regulatory变化是室内小鼠平行,适应性基因表达进化的基础
Sylvia M Durkin1, Mallory A Ballinger1, Michael W Nachman1
1Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
PLoS genetics
|February 2, 2024
概括
适应性进化在小鼠中显示了由组织特异性基因的cis-regulatory变化驱动的平行基因表达变化. 这些发现揭示了在分歧期间的早期基因调控进化.
科学领域:
- 进化生物学是进化的生物学.
- 基因组学就是基因组学.
- 分子生物学分子生物学
背景情况:
- 基因调节的变化是适应性进化的关键.
- 在短期进化中cis和trans作用因子的作用尚未完全理解.
- 研究并行进化可以揭示分歧的机制.
研究的目的:
- 为了研究适应不同气候的小鼠的基因表达模式.
- 确定早期适应性进化的 cis 和 trans 作用变化的相对贡献.
- 评估组织特异性和 cis 调控基因在并行进化的作用.
主要方法:
- 在温暖和寒冷适应小鼠菌株的肝脏和棕色脂肪组织中对基因表达的比较分析.
- 在F1杂交物中对异位基因特异性表达的分析.
- 将表达数据与人口遗传扫描进行选择的整合.
主要成果:
- 观察到平行基因表达的变化比预期的更频繁.
- 表达进化主要与组织特异性和cis调节基因有关.
- 在自然种群中选择的基因表现出并行性,并为cis调节进行丰富,影响身体尺寸和免疫力等特征.
结论:
- 在独立适应的小鼠群体中,并行基因表达的进化在很大程度上是由cis-regulatory变化驱动的.
- 组织特异性调节在早期适应性分歧中起着重要作用.
- 在选择过程中,Cis调节的变化会影响关键的适应性表型.
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