通过图形编辑探索氨基酸反应空间的组合式爆炸
Rui Zhang1, Babak Mahjour2, Andrew Outlaw2
1Department of Chemistry, University of Michigan, Ann Arbor, MI, USA.
Communications chemistry
|February 3, 2024
概括
研究人员探索了氨基和碳酸之间的新反应,超出了传统的胺合. 这项工作为新型分子设计和属性调整绘制未经探索的化学空间.
科学领域:
- 有机化学 有机化学
- 化学合成 化学合成
- 计算化学计算化学
背景情况:
- 氨基和碳酸是化学的基本组成部分.
- 氨基酸合反应是连接氨基和碳酸的主要方法.
- 在这些常见的化学原料之间存在着大量尚未探索的反应空间.
研究的目的:
- 系统地探索氨基和碳酸酸之间的反应空间.
- 为了研究超出氨基酸合的新反应途径.
- 为合理设计具有量身定制性质的分子创建地图.
主要方法:
- 系统地列举了涉及简单的氨基-碳酸对的反应.
- 物理化学性质的粗微调制的探索.
- 通过化学反应研究分子形状调制.
主要成果:
- 鉴定了大量尚未研究的氨基和碳酸酸之间的反应.
- 展示不同的反应途径如何影响分子性质.
- 开发一个氨基酸反应空间的综合地图.
结论:
- 这项研究扩大了氨基酸化学的已知反应空间.
- 开发的地图为化学勘探和合理设计提供了一个新的维度.
- 自动化合成方法可以使新的概念反应成为现实.
相关概念视频
Amines to Amides: Acylation of Amines
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Various carboxylic acid derivatives (such as acid chlorides, esters, and anhydrides) can be used for the acylation of amines to yield amides. The reaction requires two equivalents of amines. The first amine molecule functions as a nucleophile and attacks the carbonyl carbon to produce a tetrahedral intermediate. This is followed by the loss of the leaving group and restoration of the C=O bond.
Next, the second equivalent of amine serves as a Brønsted base and deprotonates the quaternary...
Next, the second equivalent of amine serves as a Brønsted base and deprotonates the quaternary...
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Acid Halides to Amides: Aminolysis
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Aminolysis is a nucleophilic acyl substitution reaction, where ammonia or amines act as nucleophiles to give the substitution product. Acid halides react with ammonia, primary amines, and secondary amines to yield primary, secondary, and tertiary amides, respectively.
In the first step of the aminolysis mechanism, the amine attacks the carbonyl carbon of the acyl chloride to form a tetrahedral intermediate. In the second step, the carbonyl group is re-formed with the elimination of a chloride...
In the first step of the aminolysis mechanism, the amine attacks the carbonyl carbon of the acyl chloride to form a tetrahedral intermediate. In the second step, the carbonyl group is re-formed with the elimination of a chloride...
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Preparation of Amines: Alkylation of Ammonia and Amines
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Alkylation is one of the methods used to prepare amines. Direct alkylation of ammonia or a primary amine with an alkyl halide gives polyalkylated amines along with a quaternary ammonium salt through successive SN2 reactions. This process of making the quaternary salt through the direct alkylation method is called exhaustive alkylation.
Each alkylation step makes the nitrogen center more nucleophilic, which triggers successive alkylations until a quaternary ammonium salt is formed. Considering...
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Amines to Alkenes: Hofmann Elimination
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Alkenes can be obtained from amines via an E2 elimination. The amine is first converted into a good leaving group, such as a quaternary ammonium salt. This is accomplished by treating the amine with an excess of alkyl halide, which results in a halide salt. Next, the halide salt is transformed into a hydroxide salt that functions as a base to enable elimination.
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Preparation of Amides
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Amides are synthesized by treating carboxylic acids with amines in the presence of dehydrating agents like dicyclohexylcarbodiimide (DCC).
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
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Preparation of Amines: Reductive Amination of Aldehydes and Ketones
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Carbonyl compounds and primary amines undergo reductive amination first to produce imines, followed by secondary amines in the same reaction mixture, using selective reducing agents like sodium cyanoborohydride or sodium triacetoxyborohydride. Reductive amination produces different degrees of substitution of amines depending on the starting amine substrate.
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