相关实验视频
Updated: Jul 4, 2025

14:23
Recombineering Homologous Recombination Constructs in Drosophila
Published on: July 13, 2013
19.3K
桥接DNA接触允许DPS从E. 大肠杆菌可以凝结DNA
Sneha Shahu1, Natalia Vtyurina1,2,3, Moumita Das3
1Department of Biochemistry, Indian Institute of Science, Bangalore, India.
bioRxiv : the preprint server for biology
|February 8, 2024
概括
来自饥饿细胞 (Dps) 的DNA结合蛋白优先结合超绕的DNA,形成稳定的复合体. 桥梁DNA接触是Dps核和稳定在细菌应激反应期间的关键.
科学领域:
- 微生物学 微生物学
- 生物化学 生物化学
- 结构生物学 结构生物学
背景情况:
- 来自饥饿细胞 (Dps) 的DNA结合蛋白对于细菌在压力下生存至关重要.
- 在生物体中,dps与DNA形成核相关的生物分子凝聚物.
- 纯化DPS在体外与DNA迅速形成大型复合物,但核化机制尚不清楚.
研究的目的:
- 研究DNA拓对Dps-DNA复合体的核化和形成的影响.
- 阐明DNA超级卷和结构特征在DPS凝结中的作用.
主要方法:
- 实验室研究检查了纯化Dps蛋白与具有不同拓状态的DNA之间的相互作用.
- 分析Dps复合体形成的超卷与线性,放松的DNA模板.
主要成果:
- DNA超线圈作为Dps复杂核的首选模板.
- 在DNA区域之间的桥接接触显著促进DPS凝结.
- Dps对拉伸,放松的线性DNA具有较低的亲和力.
- 一旦凝聚起来,Dps就会形成稳定的复合体,与DNA链间接触,独立于自由的Dps.
结论:
- DNA拓,特别是超卷和桥接接触,对于DPS核形成至关重要.
- 桥接接触对于Dps-DNA复合体的核化和稳定是必不可少的.
- 了解这些相互作用,可以了解细菌应激适应机制.
相关概念视频
Homologous Recombination
50.5K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.5K
Single-Strand DNA Binding Proteins
14.1K
For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
14.1K
Mismatch Repair
4.8K
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
4.8K
Replication in Prokaryotes
24.9K
DNA replication has three main steps: initiation, elongation, and termination. Replication in prokaryotes begins when initiator proteins bind to the single origin of replication (ori) on the cell's circular chromosome. Replication then proceeds around the entire circle of the chromosome in each direction from the two replication forks, resulting in two DNA molecules.
Many Proteins Work Together to Replicate the Chromosome
Replication is coordinated and carried out by a host of specialized...
Many Proteins Work Together to Replicate the Chromosome
Replication is coordinated and carried out by a host of specialized...
24.9K
Condensins
3.5K
Condensins are large protein complexes that use ATP to fuel the assembly of chromosomes during mitosis. They transform the tangled, shapeless mass of post-interphase DNA into individualized chromosomes by compacting, organizing, and segregating chromosomal DNA.
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
3.5K
Fixing Double-strand Breaks
12.6K
The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
12.6K

