艾伦古老DNA资源 (AADR) 是一个古老人类基因组的精心策划的汇编
Swapan Mallick1,2,3, Adam Micco4,5, Matthew Mah4,5
1Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA. shop@genetics.med.harvard.edu.
Scientific data
|February 10, 2024
概括
艾伦古代DNA资源 (AADR) 集中了超过10,000个古人类基因组数据集. 这本精心策划的摘要解决了数据格式的不一致性,促进了古遗传学领域的开放科学.
科学领域:
- 古遗传学是古遗传学的一部分.
- 生物信息学是一种生物信息学.
- 遗传学 遗传学 是一个
背景情况:
- 超过200篇论文发表了古代人类基因组数据.
- 公开可用的数据存在,但缺乏原始和元数据的统一格式.
- 分析和引用需要一个集中,策划和版本控制的资源.
研究的目的:
- 描述艾伦古代DNA资源 (AADR) 作为一个可引用的描述符.
- 提供最新的,精心策划的出版古代人类DNA数据汇总.
- 为了提高可访问性和研究,标准化和集中古遗传学数据.
主要方法:
- 自2019年以来一直维护艾伦古代DNA资源 (AADR).
- 从已发表的古代人类研究中整理全基因组数据.
- 在超过一百万个单核酸多态 (SNP) 中表示数据.
主要成果:
- 目前,AADR包含了超过1万个古代个体的数据.
- 该资源已经经历了六次公开发布.
- 大多数古老个体的数据代表了超过100万个SNP.
结论:
- 该AADR是古遗传学研究的重要,集中资源.
- 标准化数据策划提高了古代DNA数据集的可用性.
- AADR支持古遗传学社区的开放数据承诺.
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