芬科尼贫血路径修复了由菌素诱导的DNA跨链交叉链接
Maria Altshuller1, Xu He1, Elliot J MacKrell1
1Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA.
bioRxiv : the preprint server for biology
|February 14, 2024
概括
肠道细菌毒素可利巴克丁 (colibactin) 导致与癌症相关的DNA链间交叉链 (ICLs). 我们的研究揭示了细胞如何使用Fanconi贫血路径和转化合成来修复这些ICL,为癌症进展提供了洞察力.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
背景情况:
- 科利巴克丁是人类肠道中的细菌基因毒素,有助于结直肠癌和炎症性肠病.
- 科利巴克会诱导DNA链间交叉链 (ICLs),阻碍DNA复制.
- 已知解决ICL的细胞机制,但它们在 colibactin 耐药性中的作用尚不清楚.
研究的目的:
- 为了研究大肠杆菌素诱导的ICLs的复制合修复.
- 阐明参与耐受 colibactin DNA 损伤的途径.
主要方法:
- 使用了Xenopus蛋提取物用于生物化学研究.
- 使用带有特定部位的 colibactin-ICL 的工程塑.
- 分析了复制分叉停滞,复制体动力学和DNA修复途径激活.
主要成果:
- 在 colibactin-ICLs 的复制停止触发了复制体分解和 Fanconi 贫血路径的激活.
- 芬科尼贫血途径解开了ICLs,产生了双链断裂和单向导.
- 通过Polη和Polκ-REV1-Polζ复合物的转化合成修复了单添加管,有时引入T>N突变.
结论:
- 这项研究提供了一个生物化学框架,以了解细胞对菌素诱导的DNA损伤的耐受性.
- 这些发现阐明了复制,ICL修复和转化合成之间的相互作用,以应对临床相关的基因毒素.
- 已识别的修复途径和相关突变为我们提供了有关菌素在癌症发展中的作用的见解.
相关概念视频
DNA Damage can Stall the Cell Cycle
9.2K
In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.2K
Long-patch Base Excision Repair
7.0K
Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:
7.0K
Restarting Stalled Replication Forks
5.8K
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.8K
Base Excision Repair
22.3K
One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
The first step of...
22.3K
Homologous Recombination
50.5K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
50.5K
Fixing Double-strand Breaks
12.6K
The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
12.6K


