通过小分子化合物调节库林-RING E3 基因酶依赖的基因化
Kenneth Wu1, Robert J DeVita2, Zhen-Qiang Pan1
1Department of Oncological Sciences, The Icahn School of Medicine at Mount Sinai, New York, New York, USA.
The Journal of biological chemistry
|February 14, 2024
概括
小分子KH-4-43和#33抑制了Cullin (CUL) -RING E3泛素连接酶 (CRL),但根据CRL类型,无化会对它们的疗效产生不同的影响. 苏拉明抑制了CRLs,无论其无化状态如何.
科学领域:
- 生物化学和分子生物学
- 药物发现和开发 药物发现和开发
- 结构生物学 结构生物学
背景情况:
- 库林 (CUL) -RING (真正有趣的新基因) E3无素 (Ub) 酶 (CRL) 是最大的E3家族,对蛋白质无化至关重要.
- 作为CUL-ROC1/RBX1亚复合体的CRL核心酶,作为与E2酶,Ub,Nedd8和ARIH蛋白相互作用的枢纽,促进了Ub转移.
- 通过小分子调节CRL活性是治疗开发的关键领域.
研究的目的:
- 通过小分子化合物KH-4-43,#33和suramin对CRL抑制的内滴化影响的研究.
- 为了确定化是否会改变特定CRL (CRL4CRBN和CRL1β-TrCP) 对这些抑制剂的敏感性.
- 探索基于结构的药物设计的潜力,针对不同的CRL核心合酶结构.
主要方法:
- 评估了CRL4CRBN对CK1α和CRL1β-TrCP对β-catenin的无处不在,无论是否存在脱.
- 测试了KH-4-43,#33和苏拉明对CRL依赖的泛化反应的抑制作用.
- 分析了基于CRL类型和无化状态的差异性药物敏感性.
主要成果:
- KH-4-43 和 #33 抑制了 CK1α 的 CRL4CRBN介导的泛化,但这种抑制被 neddylated CRL4CRBN降低.
- 无论是KH-4-43还是#33,都类似地抑制了CRL1β-TrCP介导的β-catenin的全方位化,无论CRL1β-TrCP的化状态如何.
- 苏拉明抑制了CRL1和CRL4无化,而不考虑化,与KH-4-43/#33.33相反.
结论:
- 化对CRL对KH-4-43和#33抑制的敏感性有不同的影响,具体取决于CRL类型.
- 苏拉明在整个缩状态的广泛抑制突出了其针对CUL基本峡谷的独特机制.
- 临床实验室核心链酶的结构多样性为开发特定的小分子调节器提供了机会.
相关概念视频
Regulated Protein Degradation
7.3K
It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
7.3K
Covalently Linked Protein Regulators
6.8K
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
These groups modify specific amino acids in a protein....
6.8K
Anaphase Promoting Complex
2.9K
The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
2.9K
Receptor Downregulation in MVBs
2.1K
Multivesicular bodies (MVBs) are mature endosomes that sort ubiquitinated proteins and then fuse with lysosomes to degrade the sorted proteins. Epidermal growth factor (EGF) and its receptor (EGFR) form a complex that can be internalized through endocytosis, sorted into an MVB, and later degraded.
The EGFR can initiate signaling pathways that lead to cell proliferation, migration, and differentiation. Overexpression of EGFR stimulates cells to proliferate. Excessive EGFR...
The EGFR can initiate signaling pathways that lead to cell proliferation, migration, and differentiation. Overexpression of EGFR stimulates cells to proliferate. Excessive EGFR...
2.1K
Regulation of Nuclear Protein Sorting
2.4K
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
2.4K
The Proteasome
835
Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
835


