stelfi:一个R套件,适合霍克斯和Log-Gaussian-Cox点过程模型
Charlotte M Jones-Todd1, Alec B M van Helsdingen1
1Department of Statistics University of Auckland Auckland New Zealand.
Ecology and evolution
|February 15, 2024
概括
新的R包 stelfi 集成了空间时间自我激发和日志高斯学考克斯过程模型用于生态数据. 该工具增强了对生态中的点图形进展和传染事件的理解.
科学领域:
- 生态生态学 生态生态学
- 统计建模 统计建模
- 计算生物学 计算生物学
背景情况:
- 生态现象表现出复杂的空间和时间模式.
- 使用Log-Gaussian Cox过程和自我激发的点模式模型来分析生态数据.
- 现有的R软件包对于时空模型和自我激发模型都缺乏集成的功能.
研究的目的:
- 引入 R 包 stelfi,它适合时空自我激发和日志高斯式考克斯过程模型.
- 为分析复杂的生态点模式数据提供统一的框架.
- 以时空自我激发和联合概率能力扩展现有模型.
主要方法:
- 使用模板模型构建器和C++模板开发R包 stelfi的开发.
- 实现时空自我激发和日志高斯学考克斯过程模型.
- 该包适用于美国的萨斯奎奇 (大脚) 观测数据.
主要成果:
- 该stelfi包成功地适应了时空自我激发和日志高斯式考克斯过程模型.
- 对萨斯奎奇观测数据的分析揭示了对时间和空间事件进展的洞察力.
- 证明了扩展模型对于捕捉复杂生态机制的实用性.
结论:
- stelfi包提供了一个用户友好的,开源的解决方案,用于在R.中安装先进的时空点过程模型.
- 该套件有助于更深入地了解生态点模式数据的动态.
- stelfi在生态研究及其他领域具有广泛的适用性.
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