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Conservation of Protein Domains02:26

Conservation of Protein Domains

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3.1K
Conservation of Protein Domains Over Different Proteins02:26

Conservation of Protein Domains Over Different Proteins

10.9K
Protein domains are small structurally independent units that are part of a single amino acid chain.  Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
10.9K
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

6.0K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
6.0K
DNA Topoisomerases02:02

DNA Topoisomerases

31.3K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
31.3K
SN2 Reaction: Stereochemistry02:23

SN2 Reaction: Stereochemistry

9.5K
In an SN2 reaction, the nucleophilic attack on the substrate and departure of the leaving group occurs simultaneously through a transition state. As the nucleophile approaches the substrate from the back-side, the configuration of the substrate carbon changes from tetrahedral to trigonal bipyramidal and then back to tetrahedral, leading to an inversion in the configuration of the product.
If the substrate is an achiral molecule at the α-carbon, the inversion of configuration is not...
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Mechanisms of Membrane Domain Formation00:59

Mechanisms of Membrane Domain Formation

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Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
Another mechanism for membrane domain formation involves membrane proteins interacting with...
3.0K

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相关实验视频

Updated: Jul 2, 2025

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles
10:23

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

Published on: May 8, 2015

11.7K

排序酶催化蛋白质域逆转

Yan Zhou1, Thomas Durek1, David J Craik1

  • 1ARC Centre of Excellence for Innovations in Peptide and Protein Science, Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.

Angewandte Chemie (International ed. in English)
|February 17, 2024
PubMed
概括

研究人员开发了一种新的蛋白质域逆转技术,通过逆转C端段来改变蛋白质结构. 这种非自然的顺序,通过工程类型酶A实现,扩大了蛋白质工程的可能性.

科学领域:

  • 生物化学 生化学
  • 蛋白质工程是指蛋白质工程.
  • 合成生物学 合成生物学

背景情况:

  • 蛋白质的拓转换,包括循环化和循环变换,是产生新型蛋白质功能和稳定的关键.
  • 现有的方法,以自然修饰为灵感,通常保留多骨干的N-to-C方向.
  • 这些转变是通过遗传编码或酶处理来实现的.

研究的目的:

  • 引入一种新型的非自然蛋白质变异:蛋白质域逆转.
  • 以酶的方式将C端蛋白段从N-到C逆转为相对于N端部分的C-到-C配置.
  • 为了证明这种新型蛋白质工程战略的可行性和效率.

主要方法:

  • 使用一种工程类型酶A,一种转酶酶,以催化蛋白质域逆转.
  • 在温和条件下进行反应,温度范围从4°C到25°C.
  • 采用了与酶反应相容的异质生产的蛋白质基质.

主要成果:

  • 成功实现了蛋白质域逆转,创建了一个C-to-C链接.
  • 在温和温度条件下证明了高效的反应动力学.
  • 确认与通过异质表达产生的蛋白质的兼容性.
关键词:
一个纳米人体.换位方式 换位方式 换位方式排序 进行排序.拓学的拓学转胺酶可以转化.

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Chemical Modification of the Tryptophan Residue in a Recombinant Ca2+-ATPase N-domain for Studying Tryptophan-ANS FRET
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相关实验视频

Last Updated: Jul 2, 2025

Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles
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Self-assembly of Complex Two-dimensional Shapes from Single-stranded DNA Tiles

Published on: May 8, 2015

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In Vitro Directed Evolution of a Restriction Endonuclease with More Stringent Specificity
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In Vitro Directed Evolution of a Restriction Endonuclease with More Stringent Specificity

Published on: March 25, 2020

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结论:

  • 蛋白质域逆转代表了蛋白质工程的新型拓变化.
  • 工程类型酶A为催化这种非自然变异提供了一种有效的工具.
  • 该方法为设计具有改变结构和潜在新功能的蛋白质提供了新的途径.