细菌生态和进化在季节和十年尺度上趋同
Robin R Rohwer1, Mark Kirkpatrick1, Sarahi L Garcia2,3
1The University of Texas at Austin, Department of Integrative Biology, 2415 Speedway #C0930, Austin, TX 78712, USA.
bioRxiv : the preprint server for biology
|February 19, 2024
概括
生态学和进化在淡水微生物组中交织在一起. 长期数据显示微生物菌株的季节性和十年性变化,这表明是连续性的,而不是不同的过程.
科学领域:
- 微生物生态学 微生物生态学
- 进化生物学 进化生物学
- 环境科学 环境科学
背景情况:
- 传统上,生态学和进化被视为两个独立的过程.
- 它们的相互作用在微生物群落中是显著的.
- 了解自然系统中的这些动态对于预测应对全球变化的反应至关重要.
研究的目的:
- 研究自然淡水微生物群中的生态和进化过程的相互作用.
- 为全面分析建立最长的淡水时间序列元基因组数据集.
- 为了确定微生物群落的变化是否代表了不同的生态或进化事件.
主要方法:
- 收集了20年的471个样本的淡水湖的时间序列.
- 从时间序列中生成元基因组数据.
- 分析了2,855个代表物种的基因组,以确定季节和十年的变化.
- 在极端环境下,鉴定了菌株组成和基因选择的变化.
主要成果:
- 在各种微生物物种和菌株中观察到周期性季节性模式.
- 发现20%的物种在菌株组成上表现出十年的变化.
- 一种全球丰富的细菌保持了物种丰富性,但在极端情况下改变了菌株组成.
- 在积极选择下确定了氨基酸和核酸代谢基因,与有机化合物相关.
结论:
- 季节性和长期的微生物菌株动态可以被视为生态和进化过程.
- 提出一个概念框架,其中生态和进化存在于连续.
- 这种连续性更好地描述了微生物群落的变化,特别是对环境变化的反应.
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