以当地环境为指导的原子结构选择,以开发机器学习潜力
Renzhe Li1,2, Chuan Zhou1, Akksay Singh1,3,4
1Shenzhen Key Laboratory of Micro/Nano-Porous Functional Materials (SKLPM), Department of Materials Science and Engineering, Southern University of Science and Technology, Shenzhen 518055, People's Republic of China.
The Journal of chemical physics
|February 21, 2024
概括
本研究介绍了一种新的算法,用于选择原子结构来训练机器学习潜力 (MLP). 该方法有效地将数据集大小减少80%,而不会牺牲MLP模型的性能.
科学领域:
- 计算化学计算化学
- 材料科学 材料科学 材料科学
- 机器学习 机器学习
背景情况:
- 机器学习潜力 (MLP) 在计算化学和材料科学中非常重要,因为它们的准确性和效率.
- 开发可靠的MLP取决于选择适合训练的原子结构.
- 冗余或不足的数据阻碍了MLP的开发和性能.
研究的目的:
- 提出一个以当地环境为指导的选算法,用于在MLP开发中高效地选择数据集.
- 为了减少训练数据集的大小,同时保持MLP准确性.
- 提高MLP模型培训的稳定性和计算效率.
主要方法:
- 当地环境银行存储独特的原子局部环境.
- 使用欧几里德距离来评估不相似性,以确定新的环境.
- 只有当它们的当地环境与现有环境有显著差异时,才会选择新的结构.
- 该银行的更新是从选定的结构中更新新的本地环境.
主要成果:
- 该算法将Ge和Pd13H2系统的训练数据大小减少了约80%.
- 尽管数据集大小减少,但MLP模型的性能没有受到影响.
- 与最远点采样相比,该方法显示出更高的稳定性和计算效率.
- 结果独立于最初的结构选择和排序.
结论:
- 拟议的算法可以有效地选择数据集,以开发准确且计算效率高的MLP.
- 当地环境银行可以作为未来MLP开发的持续更新的数据库.
- 这种方法优化了训练数据选择过程,从而导致更好的MLP模型.
相关概念视频
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving
54
Mechanistic models play a crucial role in algorithms for numerical problem-solving, particularly in nonlinear mixed effects modeling (NMEM). These models aim to minimize specific objective functions by evaluating various parameter estimates, leading to the development of systematic algorithms. In some cases, linearization techniques approximate the model using linear equations.
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
54
Conserved Binding Sites
4.2K
Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
4.2K


