质谱仪应用研究人类微生物组
Mohamed A Raslan1, Sara A Raslan1, Eslam M Shehata1
1Drug Research Centre, Cairo, Egypt.
Advances in experimental medicine and biology
|February 27, 2024
概括
质谱法 (MS) 有助于理解人类微生物群及其代谢物. 这种技术与测序数据相结合,增强了对微生物群落及其功能的研究.
科学领域:
- 微生物学 微生物学
- 代谢学 代谢学 代谢学
- 人类生态人类生态学
背景情况:
- 微生物群是生态系统的组成部分,影响人类健康和身体化学.
- 微生物产生代谢物,这些代谢物影响它们的利基和遥远的身体部位.
研究的目的:
- 为微生物组研究提供非定向质谱 (MS) 的基础知识.
- 突出数据分析方法和微生物组测序数据的整合.
主要方法:
- 使用质谱法 (MS) 检测和识别微生物代谢物.
- 采用非向的MS技术来分析微生物组数据.
- 整合MS数据与微生物组测序数据.
主要成果:
- MS对于识别微生物代谢物和理解它们的功能作用至关重要.
- 未定位的MS产生了适用于微生物组研究的各种数据类型.
- 综合性分析,特别是将MS与测序相结合,解决了数据分析的挑战.
结论:
- 质谱法 (MS) 恢复了研究人类肠道微生物群的培养方法.
- 通过使小微生物群体的研究成为可能,MS补充了高通量测序.
- 先进的数据分析和整合是解锁微生物群洞察力的关键.
更多相关视频
09:52A Clinical Metaproteomics Workflow Implemented within Galaxy Bioinformatics Platform to Analyze Host-Microbiome Interactions Underlying Human Disease
Published on: January 10, 2025
590
08:05Guided Protocol for Fecal Microbial Characterization by 16S rRNA-Amplicon Sequencing
Published on: March 19, 2018
19.7K
相关概念视频
MALDI-TOF Mass Spectrometry
4.8K
Mass spectrometry is a powerful characterization technique that can identify and separate a wide variety of compounds ranging from chemical to biological entities, based on their mass-to-charge ratio (m/z). The instruments that allow this detection, known as mass spectrometers, have three components: an ion source, a mass analyzer, and a detector. These spectrometers differ based on the nature of their ion source and analyzers.
Matrix-assisted laser desorption ionization (MALDI) is a commonly...
Matrix-assisted laser desorption ionization (MALDI) is a commonly...
4.8K
Mass Spectrometry: Complex Analysis
772
Mass spectrometry is an important technique for the identification of pure compounds. However, it has some limitations for the analysis of complex mixtures, often due to excessive fragmentation making the spectrum too complicated to decipher. Mass spectrometry can be combined with suitable separation methods in sequence, forming hyphenated methods, which are useful in the analysis of complex mixtures.
GC–MS is a powerful hyphenated method commonly used in forensics and environmental...
GC–MS is a powerful hyphenated method commonly used in forensics and environmental...
772
Peptide Identification Using Tandem Mass Spectrometry
6.4K
Tandem mass spectrometry, also known as MS/MS or MS2, is an analytical technique that employs two mass analyzers. Essentially it is a series of mass spectrometers that helps isolate a particular biomolecule and then helps study its chemical properties.
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
6.4K
Mass Spectrometry: Overview
5.2K
Mass spectrometry is an analytical technique used to determine the molecular mass and molecular formula of a compound. The basic principle of mass spectrometry is to generate ions from the analyte molecule and measure these ion abundances against their molecular mass. One common type of ionization, known as electrospray ionization or EI, bombards the analyte molecules in the gas phase with high-energy electron beams. The electron beams displace an electron from the molecule and leave...
5.2K
Proteomics
7.3K
A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
7.3K
