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相关概念视频

Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

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A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
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Viral Mutations00:36

Viral Mutations

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A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material...
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Gene Duplication and Divergence02:37

Gene Duplication and Divergence

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The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
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Evolutionary Relationships through Genome Comparisons02:54

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Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
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Synteny and Evolution02:31

Synteny and Evolution

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John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
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Neural Circuits01:25

Neural Circuits

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Neural circuits and neuronal pools are two of the main structures found in the nervous system. Neural circuits are networks of neurons that work together to carry out a specific task or process. They consist of interconnected neurons and glial cells, which provide structural and metabolic support.
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相关实验视频

Updated: Jul 2, 2025

Viral Tracing of Genetically Defined Neural Circuitry
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通过神经网络哈普类型地图识别的初始功能性SARS-CoV-2多样化.

Soledad Delgado1, Pilar Somovilla2,3, Cristina Ferrer-Orta4

  • 1Departamento de Sistemas Informáticos, Escuela Técnica Superior de Ingeniería de Sistemas Informáticos, Universidad Politécnica de Madrid, Madrid 28031, Spain.

Proceedings of the National Academy of Sciences of the United States of America
|February 28, 2024
PubMed
概括

SARS-CoV-2 宿主内部多样化揭示了影响RNA合成的突变. 这些关键突变在COVID-19患者的早期流行病阶段被确定.

关键词:
在 COVID-19 疫情中,类过渡 类过渡 类过渡在宿主内部的进化过程中.自组织地图 - 自组织地图病毒类准物种病毒类准物种

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科学领域:

  • 病毒学 病毒学
  • 分子生物学分子生物学
  • 基因组学就是基因组学.

背景情况:

  • 自从出现以来,SARS-CoV-2 (严重急性呼吸系统综合征冠状病毒2) 迅速演变为多种类型.
  • 了解个体患者内肠道多样化事件对于跟踪病毒演变至关重要.

研究的目的:

  • 为了研究SARS-CoV-2的宿主内部多样化.
  • 在大流行早期,确定影响病毒RNA合成的突变.

主要方法:

  • 从鼻样本中分析SARS-CoV-2单元型谱,使用3D自组织神经单元型图 (SOMs).
  • 专注于nsp12和spike (S) 编码区域内的突变光谱.
  • 实验室原料扩展试验用于评估已识别突变的RNA合成动力学.

主要成果:

  • 在病毒类物种中,SOMs揭示了病毒类类物种中的主导和低频突变云.
  • 在主神经元中发现了6个偏差的哈普类型序列.
  • 神经云中的突变影响了nsp12-nsp8-nsp7聚合酶复合体,改变了RNA合成动力学.

结论:

  • 鉴定的突变与SARS-CoV-2RNA合成修饰有关.
  • 这些突变可能发生在COVID-19患者的宿主内部多样化过程中,在疫情初期.