相关实验视频
Updated: Jul 1, 2025

12:29
mRNA Interactome Capture from Plant Protoplasts
Published on: July 28, 2017
9.1K
植物塑编码RNA聚合酶的冷EM结构
Xiao-Xian Wu1, Wen-Hui Mu2, Fan Li3
1Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China.
Cell
|March 1, 2024
概括
在结构上揭示了叶绿体转录机制,即塑编码RNA聚合酶 (PEP) 和相关蛋白质 (PAP) 的复合体. 这些近原子分辨率的冷EM结构阐明了PEP-PAP相互作用及其在质细胞基因表达中的作用.
科学领域:
- 分子生物学
- 结构生物学
- 植物科学
背景情况:
- 叶绿体是植物和藻类细胞中的重要器官,对于光合作用至关重要.
- 塑编码RNA聚合酶 (PEP) 是转录质细胞基因的主要酶.
- PEP 作为与核编码的 PEP 相关蛋白质 (PAP) 的复合体起作用.
研究的目的:
- 确定叶绿体转录装置的高分辨率结构.
- 为了阐明PEP-PAP超级综合体的建筑组织.
- 为了解质体转录调节提供结构基础.
主要方法:
- 使用冷电子显微镜 (cryo-EM) 来解析结构.
- 确定了阿波酶和转录延长复合物的结构.
- 实现了近原子分辨率以进行详细分析.
主要成果:
- PEP核心结构类似于细菌RNA聚合酶.
- 十五个PAP与PEP核心外围结合,形成一个超级复合体.
- PAP涉及超复杂的组装,保护和RNA处理链接.
结论:
- 这项研究揭示了叶绿体转录机制的详细结构.
- 这些研究结果提供了对PPP的功能作用的结构性见解.
- 这项工作为质细胞基因表达的机理研究奠定了基础.
相关概念视频
Eukaryotic RNA Polymerases
24.2K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.2K
Bacterial RNA Polymerase
29.5K
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
29.5K
Transcription Initiation
16.4K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.4K
RNA Polymerase II Accessory Proteins
9.2K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.2K
RNA Structure
71.5K
Overview
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
71.5K
CRISPR and crRNAs
17.0K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.0K

