组织使用偏好和内在无序区域重塑心脏中的替代拼接衍生的蛋白形
Journal of proteome research
|March 8, 2024
概括
计算分析显示,由于替代拼接,人类心脏中出现了216种新的蛋白质变体. 这些新型异构体,特别是在心房和心室,突出显示了蛋白质组.
科学领域:
- 蛋白质组学是指蛋白质组学.
- 分子生物学分子生物学
- 生物信息学是一种生物信息学.
背景情况:
- 替代拼接显著扩大了人类蛋白质组.
- 了解组织特异性蛋白质变体对于心脏研究至关重要.
研究的目的:
- 在人类心脏腔中以计算方式识别和表征替代拼接衍生的蛋白质变体.
- 调查这些新型蛋白质异构体的功能影响.
主要方法:
- 质谱学数据分析.
- 利用RNA测序数据库进行异型发现.
- 生物信息学预测蛋白质区域的功能.
主要成果:
- 在心房和心室中确定了216种非正规蛋白质异型.
- 发现了52种新型异构体,这些异构体不在瑞士Prot.
- 发现了29种具有组织特异性表达的受调节异型,包括TNS1和PDLIM3-2/ALP-H.
- 变异区域在与蛋白质和RNA结合有关的本质上混乱的区域中得到丰富.
结论:
- 替代拼接通过修改内在无序的区域来使心脏的蛋白质组多样化.
- 这些修改有助于从蛋白质序列生成生物功能.
- 新型蛋白质变体为了解心脏生物学和疾病提供了新的途径.
相关概念视频
Alternative RNA Splicing
21.1K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
21.1K
RNA Splicing
56.3K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
56.3K
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K


