Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

5.7K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
5.7K
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

7.1K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
7.1K
What is Population Genetics?01:25

What is Population Genetics?

57.9K
A population is composed of members of the same species that simultaneously live and interact in the same area. When individuals in a population breed, they pass down their genes to their offspring. Many of these genes are polymorphic, meaning that they occur in multiple variants. Such variations of a gene are referred to as alleles. The collective set of all the alleles within a population is known as the gene pool.
57.9K
Gene Duplication and Divergence02:37

Gene Duplication and Divergence

6.1K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.1K
Phylogenetic Trees03:21

Phylogenetic Trees

45.3K
Phylogenetic trees come in many forms. It matters in which sequence the organisms are arranged from the bottom to the top of the tree, but the branches can rotate at their nodes without altering the information. The lines connecting individual nodes can be straight, angled, or even curved.
45.3K
Mutation, Gene Flow, and Genetic Drift01:09

Mutation, Gene Flow, and Genetic Drift

58.4K
In a population that is not at Hardy-Weinberg equilibrium, the frequency of alleles changes over time. Therefore, any deviations from the five conditions of Hardy-Weinberg equilibrium can alter the genetic variation of a given population. Conditions that change the genetic variability of a population include mutations, natural selection, non-random mating, gene flow, and genetic drift (small population size).
58.4K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

Replaying germinal center evolution on a quantified affinity landscape.

Cell·2026
Same author

Tree reconstruction guarantees from CRISPR-Cas9 lineage tracing data using Neighbor-Joining.

Genome research·2026
Same author

Hypervariable loop profiling decodes sequence determinants of antibody stability.

Nature structural & molecular biology·2026
Same author

Inference of germinal center evolutionary dynamics via simulation-based deep learning.

eLife·2026
Same author

Separating selection from mutation in antibody language models.

eLife·2026
Same author

Mapping cis-regulatory mutations at scale in sorghum enables modulation of gene expression.

Nature biotechnology·2026
Same journal

MetaboNet-Bench: A Multi-modal Benchmark for Glucose Forecasting in Type 1 Diabetes.

ArXiv·2026
Same journal

A Positron Range Correction with Texture Preservation Framework in PET Imaging.

ArXiv·2026
Same journal

Automated optimization of force field parameters against ensemble-averaged measurements with Bayesian Inference of Conformational Populations.

ArXiv·2026
Same journal

Droplet Fusion as a Relaxation Process: Comparison with Shape Recovery of Newtonian and Viscoelastic Droplets.

ArXiv·2026
Same journal

Ridge-filter crosstalk in conformal proton FLASH planning: dependence on beamlet pitch and iterative mitigation.

ArXiv·2026
Same journal

Electrochemical DNA Hairpin Sensors for Differentiating Small Molecule Intercalation from Minor Groove Binding.

ArXiv·2026
查看所有相关文章

相关实验视频

Updated: Jul 1, 2025

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
08:03

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations

Published on: December 7, 2021

2.2K

从任意大种群的精确和高效的植物动力学模拟.

Michael Celentano1, William S DeWitt2, Sebastian Prillo2

  • 1Department of Statistics, University of California, Berkeley.

ArXiv
|March 11, 2024
PubMed
概括
此摘要是机器生成的。

本研究介绍了一种高效的算法,通过将复杂的确定过程转化为更简单的模型来模拟进化树. 这一突破使得大量人群的模拟速度更快,这对于推进植物动力学推理方法至关重要.

更多相关视频

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing
10:18

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing

Published on: October 16, 2018

12.1K
Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

15.9K

相关实验视频

Last Updated: Jul 1, 2025

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
08:03

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations

Published on: December 7, 2021

2.2K
Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing
10:18

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing

Published on: October 16, 2018

12.1K
Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

15.9K

科学领域:

  • 植物动力学是关于植物动力学的.
  • 计算生物学 计算生物学
  • 进化遗传学 进化遗传学

背景情况:

  • 生物学研究经常从采样的个体推断进化的历史,导致确定树是完整的种群树的子集.
  • 确定树可以被抽样偏差扭曲,需要模型来考虑人口动态和确定过程.
  • 模拟这些树木对于植物动力学建模和基准推理方法至关重要,但由于人口规模大,计算成本昂贵.

研究的目的:

  • 开发一个计算效率高的算法来模拟确定的进化树.
  • 为了克服与模拟植物动力学中的大种群树相关的高昂计算成本.
  • 为了实现来自极大群体的模拟,这对于推断方法的进步至关重要.

主要方法:

  • 证明了同等工艺的存在,在部分确定的工艺中采用完整的抽样和没有死亡.
  • 利用这一理论发现开发了一种新的,高效的树模拟算法.
  • 算法的计算成本与最终模拟树的大小线性扩展,独立于人口大小.

主要成果:

  • 开发了一种算法,可以显著降低模拟进化树的计算负担.
  • 从以前计算难以处理的种群大小启用模拟.
  • 算法的效率独立于底层人口的大小.

结论:

  • 新的算法为植物动力学中的树模拟提供了前所未有的加速.
  • 这一进步将促进开发需要大量模拟数据的新型推理方法.
  • 该方法适用于一般的多类型出生-死亡-突变采样模型.