监管网络结构对复杂特征遗传性和进化的重要性
Katherine Stone1,2, John Platig3,4,5, John Quackenbush1,2,6
1Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
bioRxiv : the preprint server for biology
|March 11, 2024
概括
复杂的特征受到许多基因的影响. 遗传性集中在特定组织的基因网络中,特别是在调控"枢纽",使特征进化和适应成为可能.
科学领域:
- 遗传学 是一个遗传学.
- 系统生物学 系统生物学
- 进化生物学 进化生物学
背景情况:
- 复杂的特征受到众多遗传位置的影响,通常是调节元素,表现出表观性和性.
- 全基因模型表明了广泛的基因相互作用,这可能解释了全基因组关联研究 (GWAS) 中错过的遗传性.
- 了解环境压力下的复杂特征的进化能力至关重要.
研究的目的:
- 为了研究复杂特征的分子结构.
- 分析SNP在组织特异性监管网络中的遗传性分布.
- 了解复杂的特征是如何根据环境变化而演变的.
主要方法:
- 对SNP遗传分布的系统分析.
- 在29个组织特定表达量特征位置 (eQTL) 网络中进行了检查.
- 网络分析以确定功能相关的SNP基因模块和"枢纽".
主要成果:
- 复杂特征的遗传性聚集在少数特定于组织的,功能相关的SNP基因模块中.
- 显著的遗传性集中在局部网络"枢纽"中,这些枢纽充当组织特异性的监管元素.
- 这种网络结构放大了基因型-表型连接,缓冲了有害的遗传效应.
结论:
- 已识别的网络结构为复杂的特征架构和演变提供了一个框架.
- 组织特异性调节枢纽是自然选择的优先目标,促进了适应.
- 这种组织允许复杂的特征在应对环境约束的情况下演变.
相关概念视频
Heritability
200
Heritability is a statistical concept that measures the degree to which genetic differences among individuals contribute to trait variations within a population. It is a fundamental idea in genetics, often prone to misinterpretation. Heritability is expressed as a percentage, reflecting the proportion of variation in a specific trait across a population that can be linked to genetic differences. However, it's important to understand that heritability does not determine how "genetic"...
200
Epistasis
46.7K
In addition to multiple alleles at the same locus influencing traits, numerous genes or alleles at different locations may interact and influence phenotypes in a phenomenon called epistasis. For example, rabbit fur can be black or brown depending on whether the animal is homozygous dominant or heterozygous at a TYRP1 locus. However, if the rabbit is also homozygous recessive at a locus on the tyrosinase gene (TYR), it will have an unshaded coat that appears white, regardless of its TYRP1...
46.7K
Regulation of Expression Occurs at Multiple Steps
3.0K
3.0K
Inheritance
390
Gregor Mendel's pioneering work on the principles of inheritance fundamentally transformed our understanding of how traits are transmitted from generation to generation. His experiments with pea plants laid the groundwork for the discovery of genes, discrete units within organisms that control heredity.
Each gene exists in pairs, and the combination of these genes from both parents forms an individual's genotype. This genotype is a blueprint of potential traits. Examples of genotype...
Each gene exists in pairs, and the combination of these genes from both parents forms an individual's genotype. This genotype is a blueprint of potential traits. Examples of genotype...
390
Mutation, Gene Flow, and Genetic Drift
58.4K
In a population that is not at Hardy-Weinberg equilibrium, the frequency of alleles changes over time. Therefore, any deviations from the five conditions of Hardy-Weinberg equilibrium can alter the genetic variation of a given population. Conditions that change the genetic variability of a population include mutations, natural selection, non-random mating, gene flow, and genetic drift (small population size).
58.4K
Regulation of Expression at Multiple Steps
906
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
906


