背景从未连接的网站选择导致有害突变的非独立进化
Joseph Matheson1,2, Joanna Masel1
1Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA.
Genome biology and evolution
|March 14, 2024
概括
背景选择,即由于对有害等位基因的选择而导致中性遗传多样性的减少,在未连接的基因位点中比以前想象的要强. 这种影响独立于种群规模,并影响整个基因组的遗传多样性.
科学领域:
- 进化遗传学的进化遗传学
- 人口遗传学 人口遗传学
- 基因组学就是基因组学.
背景情况:
- 背景选择通过清除有害的等位基因来减少中性遗传多样性.
- 通常,模拟的重点是基因组窗口中的链接选择.
- 不关联的背景选择对中性多样性的影响不太清楚.
研究的目的:
- 调查相关和非相关的背景选择对中性多样性的相对贡献.
- 评估背景选择对具有高有害突变率的人类基因组的影响.
- 检查背景选择强度,基因组位置和种群大小之间的关系.
主要方法:
- 模拟一种类似人类的基因组,其中包含高有害突变率.
- 在链接和非链接背景选择下对中性多样性减少的分析.
- 模拟结果与分析近似结果的比较.
主要成果:
- 非链接的背景选择对中性多样性的影响比链接的背景选择更大.
- 背景选择减少了中性遗传多样性的独立于人口普查人口大小.
- 选择强度增加了基因区域之外的背景选择,这与相关理论相矛盾.
- 基因区域内的中性多样性表明独立于选择强度.
- 有害的基因负载分散不足,这表明突变的进化不是独立的.
结论:
- 不相关的背景选择是中性多样性减少的重要驱动因素,可能比相关的选择更重要.
- 这些发现挑战了只关注链接选择的传统模型.
- 这项研究为观察到的有害遗传负载模式提供了非史学解释.
相关概念视频
Mismatch Repair
4.8K
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
4.8K
Mutation, Gene Flow, and Genetic Drift
58.4K
In a population that is not at Hardy-Weinberg equilibrium, the frequency of alleles changes over time. Therefore, any deviations from the five conditions of Hardy-Weinberg equilibrium can alter the genetic variation of a given population. Conditions that change the genetic variability of a population include mutations, natural selection, non-random mating, gene flow, and genetic drift (small population size).
58.4K
Frequency-dependent Selection
22.0K
When the fitness of a trait is influenced by how common it is (i.e., its frequency) relative to different traits within a population, this is referred to as frequency-dependent selection. Frequency-dependent selection may occur between species or within a single species. This type of selection can either be positive—with more common phenotypes having higher fitness—or negative, with rarer phenotypes conferring increased fitness.
22.0K
Genetic Drift
39.7K
Natural selection—probably the most well-known evolutionary mechanism—increases the prevalence of traits that enhance survival and reproduction. However, evolution does not merely propagate favorable traits, nor does it always benefit populations.
39.7K
Types of Selection
40.4K
Natural selection influences the frequencies of particular alleles and phenotypes within populations in several different ways. Primarily, natural selection can be directional, stabilizing, or disruptive. Directional selection favors one extreme trait and shifts the population towards that phenotype while selecting against individuals displaying alternate traits. Stabilizing selection favors an intermediate trait with a narrow range of variation. Deviation from the optimal phenotype towards an...
40.4K
Gene Evolution - Fast or Slow?
7.1K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.1K


