Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

7.1K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
7.1K
Gene Duplication and Divergence02:37

Gene Duplication and Divergence

6.1K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.1K
Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

5.7K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
5.7K
Speciation Rates01:07

Speciation Rates

21.2K
Overview
21.2K
Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

2.4K
2.4K
Genetic Drift03:33

Genetic Drift

39.7K
Natural selection—probably the most well-known evolutionary mechanism—increases the prevalence of traits that enhance survival and reproduction. However, evolution does not merely propagate favorable traits, nor does it always benefit populations.
39.7K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

Are interphylum spiralian relationships resolvable?

eLife·2026
Same author

The Morphology and Small Subunit rDNA Gene Phylogeny of the Novel Goniomonad Genus Ebisugoniomonas and Two Novel Poseidogoniomonas Species.

The Journal of eukaryotic microbiology·2026
Same author

The evolution of gene functional repertoire in Amorphea: divergent strategies across Amoebozoa, Fungi, and Metazoa.

Molecular biology and evolution·2026
Same author

OligoN-Design: A Simple and Versatile Tool to Design Specific Probes and Primers From Large Heterogeneous Datasets.

Molecular ecology resources·2026
Same author

Looks can be deceiving: discordances in phylogeny and morphology within loricate choanoflagellates.

Open biology·2026
Same author

Degrees of convergent evolution in rodent adaptations to arid environments.

Genome research·2026

相关实验视频

Updated: Jun 30, 2025

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

15.9K

杜洛·帕西蒙尼 (Dollo Parsimony) 过高估计了祖先的基因内容重建

Alex Gàlvez-Morante1, Laurent Guéguen2, Paschalis Natsidis3

  • 1Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Barcelona 08003, Spain.

Genome biology and evolution
|March 22, 2024
PubMed
概括

杜洛省略高估了祖先的基因含量,因为它对基因收益的假设. 这项研究表明,最大概率方法更适合使用序列同性学重建基因家族进化.

关键词:
杜洛·帕西蒙尼 (Dollo Parsimony) 是一个非常富裕的公司.祖先的重建 祖先的重建基因家族 进化 基因家族 进化这是最大的可能性.人类基因组学是什么?

更多相关视频

Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains
06:18

Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains

Published on: November 30, 2021

3.8K
Primer Extension Capture: Targeted Sequence Retrieval from Heavily Degraded DNA Sources
15:28

Primer Extension Capture: Targeted Sequence Retrieval from Heavily Degraded DNA Sources

Published on: September 3, 2009

20.2K

相关实验视频

Last Updated: Jun 30, 2025

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
08:57

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

Published on: August 14, 2018

15.9K
Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains
06:18

Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains

Published on: November 30, 2021

3.8K
Primer Extension Capture: Targeted Sequence Retrieval from Heavily Degraded DNA Sources
15:28

Primer Extension Capture: Targeted Sequence Retrieval from Heavily Degraded DNA Sources

Published on: September 3, 2009

20.2K

科学领域:

  • 进化生物学是进化的生物学.
  • 基因组学就是基因组学.
  • 生物信息学是一种生物信息学.

背景情况:

  • 祖先的重建是理解基因家族演变的关键.
  • 杜洛是这个任务的一个常见但潜在的有缺陷的方法.
  • 它的假设是字符没有恢复冲突与分子进化现实.

研究的目的:

  • 为了测试Dollo parsimony适用于祖先基因内容重建的适用性.
  • 为了比较Dollo节与最大概率方法.
  • 用模拟和真实真核生物数据评估方法性能.

主要方法:

  • 模拟了5000个基因数据集,具有不同的进化速率.
  • 应用多洛和最大概率方法用于祖先重建.
  • 重建的蛋白质域进化在一个真核生物的基因组.

主要成果:

  • 杜洛经常高估了祖先的基因含量.
  • 过高估计在家族遗传树的根部附近最为明显.
  • 最大概率方法提供了更准确的重建.

结论:

  • 根据序列同质性,Dollo parsimony对于基于序列同质性的祖先重建是不适当的.
  • 它的非互惠收益假设阻碍了准确的进化推断.
  • 对于基因家族进化研究,建议采用最大概率的方法.