脂聚糖 调节巨细胞RNA结合蛋白质组
Deepali Rathore1, Matthew J Marino1, Jiraphorn Issara-Amphorn1
1Functional Cellular Networks Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892, United States.
这项研究揭示了RNA-蛋白相互作用如何调节先天免疫力. 研究人员确定了关键的RNA结合蛋白 (RBPs),在巨细胞中激发脂聚糖 (LPS) 刺激后改变它们的RNA结合活性.
科学领域:
- 分子生物学分子生物学
- 免疫学 免疫学 免疫学
- 蛋白质组学是指蛋白质组学.
背景情况:
- RNA-蛋白相互作用调节细胞信号通路.
- 特定的RNA-蛋白相互作用调节在先天免疫反应期间的转录后控制.
研究的目的:
- 在脂聚糖化物 (LPS) 治疗后调查小鼠巨细胞的RNA结合蛋白质组的变化.
- 确定参与天生的免疫信号传递的RNA结合蛋白 (RBPs).
主要方法:
- 在细胞培养中利用氨基酸稳定同位素标记 (SILAC) 进行定量蛋白质组学.
- 采用RNA测序,液体染色学-质谱/质谱 (LC-MS/MS) 和RNP复合体净化.
- 使用核酶P1消化分析了氨基酸分辨率的RBP-RNA结合点.
主要成果:
- 在LPS刺激后的巨细胞中鉴定出明显受影响的RBP.
- 转录和蛋白质丰度的相关变化与改变的蛋白质-RNA结合.
- 突出了Il1α,MARCKS和ACOD1作为天生的免疫信号传递中的潜在RBP.
结论:
- RNA-蛋白相互作用在调节先天免疫信号传递方面发挥着至关重要的作用.
- 这项研究为研究免疫力中的RBP-RNA相互作用提供了一个框架.
- 确定了针对先天免疫的进一步功能研究的特定RBP候选者.
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