沿着多细胞真核细胞系的基因家族收益和损失的宏观进化动态
Mirjana Domazet-Lošo1, Tin Široki2, Korina Šimičević2
1Department of Applied Computing, Faculty of Electrical Engineering and Computing, University of Zagreb, Unska 3, HR-10000, Zagreb, Croatia. mirjana.domazet-loso@fer.hr.
Nature communications
|March 27, 2024
概括
核生物中的基因家族含量在重大转变期间达到顶峰,然后下降,表明基因组简化是关键的进化力量. 这种复杂性往往与生物体复杂性脱.
科学领域:
- 进化生物学是进化的生物学.
- 基因组学就是基因组学.
- 宏观进化是如何发生的
背景情况:
- 基因的增加和损失是主要的真核细胞群的动态进化过程.
- 基因家族动态的完整进化轨迹仍然不完全理解.
- 基因组复杂性的变化对于理解生命的多样化至关重要.
研究的目的:
- 重建基因家族在广泛的真核生物物种中获取和丧失的进化动态.
- 提供从早期细胞祖先到现存的真核生物的基因组复杂性变化的全面视图.
- 调查基因家族进化中的共同模式,跨越多种血统.
主要方法:
- 基因家族在整个进化历史上获得和丧失的分析.
- 从细胞生物的祖先到352个真核生物物种的进化动态的重建.
- 进行比较基因组学以推断祖先和现存基因内容.
主要成果:
- 在所有研究的基因系中观察到基因家族内容的共同进化模式.
- 基因家族数量在重大进化和生态转型期间达到顶峰.
- 对于现存的有机体,人们观察到基因家族含量逐渐减少.
结论:
- 通过基因家族丧失来简化基因组是Phanerozoic基因组中占主导地位的进化趋势.
- 这种简化很可能是由生态专业化和功能外包驱动的.
- 基因组复杂性经常与感知到的生物复杂性脱,挑战传统观点.
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