通过CHO基因组规模模型推动数字生物制造
Seo-Young Park1, Dong-Hyuk Choi1, Jinsung Song1
1School of Chemical Engineering, Sungkyunkwan University, Suwon, Gyeonggi-do 16419, Republic of Korea.
Trends in biotechnology
|March 28, 2024
概括
对中国仓鼠卵巢 (CHO) 细胞的基因组规模代谢模型 (GEM) 提供了对细胞代谢和生物处理的见解. 未来的集成模型与人工智能相结合,将推动生物制造.
科学领域:
- 生物技术是生物技术.
- 代谢工程是代谢工程.
- 系统生物学 系统生物学
背景情况:
- 中国仓鼠卵巢 (CHO) 细胞对于生物制药生产至关重要.
- 基因组规模代谢模型 (GEMs) 为了解细胞代谢提供了一个框架.
研究的目的:
- 提供CHO细胞GEM及其应用的全面概述.
- 突出改善和整合CHO细胞模型的机会.
- 讨论CHO GEMs在促进生物处理方面的作用.
主要方法:
- 审查关于CHO GEMs的现有文献.
- 流量平衡分析 (FBA) 方法的分析.
- 讨论生物过程优化中的in silico方法.
主要成果:
- CHO宝石已经发生了显著的进化,为CHO细胞代谢提供了机械的洞察力.
- 目前的模型有助于合理的细胞系发展和生物过程改进.
- 多种细胞过程和数据的整合可以进一步提高模型的实用性.
结论:
- 宝石是理解和优化哺乳动物细胞培养的重要工具.
- 未来的发展应该侧重于整合性模型和社区协作.
- 与人工智能和系统工程相结合的CHO GEM将对未来的生物处理管道至关重要.
相关概念视频
Genomics
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
Genome Annotation and Assembly
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
Synthetic Biology
Synthetic biology is an interdisciplinary science that involves using principles from disciplines such as engineering, molecular biology, cell biology, and systems biology. It involves remodeling existing organisms from nature or constructing completely new synthetic organisms for applications such as protein or enzyme production, bioremediation, value-added macromolecule production, and the addition of desirable traits to crops, to name a few.
Golden rice
Golden rice is a genetically modified...
Golden rice
Golden rice is a genetically modified...
The Central Dogma
The central dogma explains the flow of genetic information from DNA nucleotides to the amino acid sequence of proteins.
RNA is the Missing Link Between DNA and Proteins
In the early 1900s, scientists discovered that DNA stores all the information needed for cellular functions and that proteins perform most of these functions. However, the mechanisms of converting genetic information into functional proteins remained unknown for many years. Initially, it was believed that a single gene is...
RNA is the Missing Link Between DNA and Proteins
In the early 1900s, scientists discovered that DNA stores all the information needed for cellular functions and that proteins perform most of these functions. However, the mechanisms of converting genetic information into functional proteins remained unknown for many years. Initially, it was believed that a single gene is...
Bioreactor Controls-III
Strain improvement is a foundational strategy in industrial microbiology aimed at maximizing microbial productivity, particularly because natural isolates typically yield commercially valuable products in very low concentrations. Although optimizing the culture medium and environmental conditions can improve yields, these adjustments are inherently limited by the organism’s genetic potential. As a result, the focus shifts toward genetic modifications to enhance biosynthetic capacity. The...
Upstream Processing
Upstream processing represents a critical phase in biomanufacturing, wherein biological systems such as microorganisms, mammalian cells, or insect cells are cultivated to produce therapeutic proteins, vaccines, enzymes, or other biologically derived products. This phase encompasses all steps from the selection and genetic manipulation of the production organism to the cultivation of cells in bioreactors under tightly controlled environmental conditions.Host Selection and Genetic OptimizationThe...


