来自病原体的高复制转体子产生了一个保存的sRNA家族,具有新的宿主免疫点
Lukas Kunz1, Manuel Poretti1,2, Coraline R Praz1,3
1Department of Plant and Microbial Biology, University of Zürich, Zollikerstrasse 107, CH-8008 Zürich, Switzerland.
Molecular plant-microbe interactions : MPMI
|March 29, 2024
概括
小麦粉病原体从转位子进化出植物微RNA (miRNA) 的功能模仿物. 这些模仿小RNAs (sRNAs) 准小麦基因,影响植物免疫力和宿主寄生虫进化.
科学领域:
- 进化生物学是进化的生物学.
- 植物病理学 植物病理学
- 分子遗传学 分子遗传学
背景情况:
- 小RNAs (sRNAs) 调解基因沉默,并且可以在物种之间转移.
- 进化的真核微生物对宿主调节RNA的功能模仿仍然不太了解.
- 短间隔核元素 (SINEs) 是移动的遗传元素,在宿主-病原体相互作用中起到很大程度上未知的作用.
研究的目的:
- 在小麦粉病原体中识别和描述新的小RNA (sRNA).
- 研究病原体衍生的sRNAs的进化起源和功能机制.
- 了解这些sRNA在宿主-病原体相互作用和植物免疫力中的作用.
主要方法:
- 病原体基因组的生物信息分析以确定sRNA家族.
- 使用分子生物学技术对已识别的sRNA进行功能性表征.
- 基因表达分析和植物免疫测定.
主要成果:
- 鉴定SINE_sRNA1,一种sRNA家族,其来源于小麦粉病原体SINE逆转移体.
- SINE_sRNA1作为小麦微RNA (miRNA) 的功能模仿.
- SINE_sRNA1的目标是Tae_AP1,一种增强模式触发免疫 (PTI) 和效应器触发免疫 (ETI) 的小麦基因.
结论:
- 转子子可以促进真核微生物中功能性小RNA模拟物的进化.
- 病原体衍生的sRNA可以操纵宿主免疫力,这表明它在宿主-寄生虫进化军备竞赛中的作用.
- SINE_sRNA1和Tae_AP1代表了驱动植物防御机制的功能性创新.
相关概念视频
LTR Retrotransposons
17.5K
LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
17.5K
Non-LTR Retrotransposons
11.5K
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
11.5K
Retroviruses
12.3K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.3K
DNA-only Transposons
14.5K
DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
The donor site from where the transposon is excised is either degraded or...
The donor site from where the transposon is excised is either degraded or...
14.5K
piRNA - Piwi-interacting RNAs
6.9K
PIWI-interacting RNAs, or piRNAs, are the most abundant short non-coding RNAs. More than 20,000 genes have been found in humans that code for piRNAs while only 2000 genes have been found for miRNAs. piRNAs can act at the transcriptional and post-transcriptional levels and have a vital role in silencing transposable elements present in germ cells. They are also involved in epigenetic silencing and activation. Previously, they were thought to function only in germ cells but new evidence suggests...
6.9K
Overview of Transposition and Recombination
15.5K
Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
15.5K


