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相关概念视频

Bacterial Flora of the Large Intestine01:29

Bacterial Flora of the Large Intestine

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The gut microbiome is formed by a vast and diverse community of bacteria that colonizes our large intestine. These bacteria start residing in the gut from birth and continue diversifying throughout life, influenced by factors such as diet, lifestyle, and stress. The gut bacterial community also includes bacteria from food and those that enter the colon through the anus.
The normal gut flora of the colon plays a critical role in generating essential vitamins such as vitamins K, B5, and B7.
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Introduction to the Human Microbiota01:22

Introduction to the Human Microbiota

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Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity,...
222
Development of Human Microbiota01:30

Development of Human Microbiota

68
The human microbiota begins developing at birth and undergoes continual change as we age. Infancy marks a critical period of microbial sensitivity, offering a “window of opportunity” during which beneficial microbes help mature the immune system. By age three, children typically develop a more stable and diverse microbial community. Newborns acquire microbes from their immediate environment; vaginal delivery favors maternal vaginal microbes, while cesarean births favor microbes from...
68
Microbiota of the Stomach and Small Intestine01:27

Microbiota of the Stomach and Small Intestine

92
The human gastrointestinal (GI) tract is characterized by distinct physicochemical conditions that shape its microbial communities. Among these, the stomach presents a particularly challenging environment for microbial colonization due to its highly acidic pH, ranging from 1 to 3. This extreme acidity effectively limits microbial density. However, certain acid-tolerant microorganisms are capable of surviving in this niche. Notably, Helicobacter pylori can colonize the gastric mucosa,...
92
Microbiota of the Large Intestine01:27

Microbiota of the Large Intestine

108
The large intestine hosts the most densely populated microbial ecosystem in the human body. This complex community primarily consists of anaerobic bacteria, with Bacillota (formerly Firmicutes) and Bacteroidota (formerly Bacteroidetes) as the predominant groups. The distribution of these microbes varies along different sections of the large intestine, influenced by local environmental factors such as oxygen availability and nutrient composition.The cecum, located at the beginning of the large...
108
Functions of the Gut Microbiota01:18

Functions of the Gut Microbiota

254
The gut microbiota includes trillions of microorganisms that colonize the human gastrointestinal tract, including bacteria, archaea, viruses, and fungi. This complex ecosystem plays a critical role in maintaining intestinal and systemic health. Most of these microbes inhabit the large intestine, establishing a relatively stable and diverse community that contributes to gut homeostasis through various metabolic, immunological, and protective mechanisms.Dominant bacterial phyla, such as...
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相关实验视频

Updated: May 5, 2026

Co-culture of Living Microbiome with Microengineered Human Intestinal Villi in a Gut-on-a-Chip Microfluidic Device
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Co-culture of Living Microbiome with Microengineered Human Intestinal Villi in a Gut-on-a-Chip Microfluidic Device

Published on: August 30, 2016

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通过在非人类灵长类动物肠道内的共同表达网络分析来解读宿主-微生物组相互作用.

Mika Uehara1, Takashi Inoue2, Sumitaka Hase1

  • 1Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, Japan.

mSystems
|April 1, 2024
PubMed
概括

这项研究揭示了肠道微生物组相互作用的空间变化,沿着结肠. 新的算法识别了宿主和微生物组的基因模块,揭示了宿主-微生物组关系中的细菌媒介.

关键词:
常见的海幼我们的肠道微生物组.主体-微生物群相互作用.转录元组 (metatranscriptome) 是一个转录元组.网络分析 网络分析非人类的灵长类灵长类动物.转录组 (transcriptome) 是一个转录组.

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Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems
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Co-culture of Living Microbiome with Microengineered Human Intestinal Villi in a Gut-on-a-Chip Microfluidic Device

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Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems
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An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions
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科学领域:

  • 微生物组研究的研究.
  • 系统生物学 系统生物学
  • 基因组学就是基因组学.

背景情况:

  • 主体微生物群的相互作用对健康至关重要,但在肠道的空间上有所不同.
  • 以前的研究由于分析的局限性,缺乏对这些空间变化的详细理解.

研究的目的:

  • 为了研究宿主微生物群相互作用的空间变化,沿着灵长类大肠.
  • 开发和应用一种新的基因模块提取算法,用于分析跨物种基因共同表达网络.

主要方法:

  • 双转录组对眼,横直肠和直肠样本的分析.
  • 基因共同表达网络分析以确定宿主微生物群相互作用.
  • 应用基于图形理论的算法来提取紧密交互的基因模块.

主要成果:

  • 确定了27个宿主微生物组基因模块,揭示了空间相互作用动态.
  • 发现了新的关联,包括宿主基因FBP1与Bacteroides vulgatus基因 (pfkA, fucI) 以及宿主B细胞基因与Parabacteroides distasonis trpB.
  • 拟议的算法在定义功能相关的基因模块方面超过了现有的方法.

结论:

  • 主体微生物群相互作用在结肠沿线表现出显著的空间变化.
  • 细菌基因可以在宿主微生物组相互作用中充当调解者.
  • 这种新的算法为复杂的宿主微生物组关系提供了更深入的见解.