阅读率和内子保留率的协调增长推动了在衰老和衰老过程中转子子体的表达
Kamil Pabis1,2,3, Diogo Barardo2,3, Olga Sirbu4
1Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
eLife
|April 3, 2024
概括
衰老会导致转录缺陷,如内子保留和读透,导致转子子表达的增加. 这些发现表明,非促进体驱动的可转移元素活性解释了与年龄相关的变化.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 衰老研究研究 衰老研究
背景情况:
- 衰老和衰老与广泛的转录功能障碍有关.
- 可转移元素 (TEs) 和内子的表达增加是衰老的标志.
- 驱动与年龄相关的TE表达的机制仍然不清楚.
研究的目的:
- 调查老化和衰老期间增加TE表达背后的机制.
- 为了确定转录读透和内质保留是否有助于与年龄相关的TE表达.
- 为了区分TE表达自主转位子与转录文物之间的差异.
主要方法:
- 对来自老年人纤维细胞,老化的人类细胞和老化/老化小鼠细胞的公共RNA测序 (RNA-seq) 数据集的分析.
- 重新分析RNA-seq数据,以将TE表达与内质保留和转录读透相关联.
- 使用具有诱导转录读透的模型进行实验验证.
主要成果:
- 在所有测试样本中观察到TE表达,内质保留和转录读透之间存在显著的相关性.
- 随着衰老和细胞衰老,内子保留和读透都增加,在人体样本中影响更为明显.
- 诱导的转录读透模型证实TE表达的升高,支持因果关系.
结论:
- 在衰老过程中提升TE表达与多种转录缺陷有关.
- 内部保留和转录阅读是缺乏功能促进者的TE表达的最可能的原因.
- 这些发现为与年龄相关的TE失调提供了新的解释.
关键词:
衰老的衰老 衰老的衰老染色体是一种染色体.基因表达的基因表达方式人类 人类 人类 人类 人类 人类 人类内部保留可以保持.这里是鼠标鼠标鼠标鼠标鼠标鼠标.没有香味,没有香味.转录的阅读通过.转位子表达式转位子表达式更多相关视频
相关概念视频
Non-LTR Retrotransposons
11.5K
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
11.5K
piRNA - Piwi-interacting RNAs
6.9K
PIWI-interacting RNAs, or piRNAs, are the most abundant short non-coding RNAs. More than 20,000 genes have been found in humans that code for piRNAs while only 2000 genes have been found for miRNAs. piRNAs can act at the transcriptional and post-transcriptional levels and have a vital role in silencing transposable elements present in germ cells. They are also involved in epigenetic silencing and activation. Previously, they were thought to function only in germ cells but new evidence suggests...
6.9K
Overview of Transposition and Recombination
15.5K
Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
15.5K
DNA-only Transposons
14.5K
DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
The donor site from where the transposon is excised is either degraded or...
The donor site from where the transposon is excised is either degraded or...
14.5K
LTR Retrotransposons
17.5K
LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
17.5K
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K


