内在无序区域 (IDR):对于蛋白质功能的模糊和令人困惑的概念.
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Molecular cell
|April 5, 2024
概括
内在无序区域 (IDR) 这个术语令人困惑,因为它适用于许多蛋白质类型和功能. 许多IDR在与其他分子相互作用时获得结构,使该概念不必要.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 蛋白质科学 蛋白质科学
背景情况:
- 内在无序区域 (IDR) 这个术语在科学文献中被广泛使用.
- IDR通常被认为是一种独特的蛋白质结构类别.
- 然而,IDR的定义和应用是不一致的.
研究的目的:
- 在蛋白质科学中批判性地评估内在无序区域 (IDR) 的概念和实用性.
- 要突出与IDR术语相关的模两可和局限性.
- 倡导在蛋白质结构和功能研究中使用更精确,更少混的术语.
主要方法:
- 文献综述和概念分析.
- 检查各种蛋白质结构和功能.
- 蛋白质与生物分子相互作用的分析.
主要成果:
- 大多数蛋白质含有具有IDR特征的区域.
- 术语IDR涵盖了结构和功能性质的广泛范围.
- 许多所谓的IDR在与其他分子结合时采用有序结构.
结论:
- 本质上无序区域 (IDRs) 的概念是模糊的,过于广泛的,往往是不准确的.
- 术语IDR可能会令人困惑,并可能妨碍精确的科学交流.
- 需要重新评估蛋白质术语,以更好地描述结构和功能.
更多相关视频
07:24Paramagnetic Relaxation Enhancement for Detecting and Characterizing Self-Associations of Intrinsically Disordered Proteins
Published on: September 23, 2021
1.8K
05:13Author Spotlight: Unlocking the World of Intrinsically Disordered Regions with Cellular Sensing and Responses
Published on: January 12, 2024
1.0K
相关概念视频
Intrinsically Disordered Proteins
17.8K
Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
17.8K
Conservation of Protein Domains Over Different Proteins
10.8K
Protein domains are small structurally independent units that are part of a single amino acid chain. Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
10.8K
Protein Folding
118.0K
Overview
118.0K
Conserved Binding Sites
4.2K
Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
4.2K
Protein and Protein Structure
79.5K
Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme...
A protein's shape is critical to its function. For example, an enzyme...
79.5K
Amyloid Fibrils
9.5K
Amyloid fibrils are aggregates of misfolded proteins. Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils.
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining,...
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining,...
9.5K
