古代重复和谱系特定的转换确定了ERF子家族在芽细胞的进化轨迹
Xun-Ge Zhu1,2, Ge-Ran Hutang3, Li-Zhi Gao1,4
1Germplasm Bank of Wild Species in Southwestern China, Kunming Institute of Botany, The Chinese Academy of Sciences, Kunming 650201, China.
International journal of molecular sciences
|April 13, 2024
概括
该AP2/ERF转录因子家族.
科学领域:
- 植物分子生物学 植物分子生物学
- 进化基因组学是进化的基因组学.
- 转录因子 转录因子
背景情况:
- AP2/ERF转录因子家族对植物发育和应激反应至关重要.
- 之前的研究集中在AP2和DREB亚家族,使ERF亚家族在血管精子中的进化研究不足.
研究的目的:
- 综合分析血管种子中ERF亚家族的进化史.
- 调查驱动ERF子家族扩张和分歧的机制.
主要方法:
- 对ERF亚家族的植物基因组分析,涉及107种种子种子.
- 合成网络分析以确定重复事件和进化关系.
主要成果:
- ERF亚家族的扩大归因于全基因组重复 (WGD),并联重复 (TD) 和转换事件.
- 在特定的植物家族和类 (Poaceae,Brassicaceae,Poales,Brassicales,Commelinids) 中确定了多个转移事件.
- 在ERF亚家族中观察到古老的并列重复,例如IXb亚组的起源来自IXa.
结论:
- 这项研究阐明了血管种类中ERF亚家族的复杂进化轨迹.
- 重复事件,特别是TD和转换,显著影响了ERF副本数量变化和功能分歧.
- 这些发现为这种重要的植物转录因子家族的进化提供了新的见解.
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