进化保存的昼夜时钟的转录性重新连接
Alejandra Goity1,2, Andrey Dovzhenok3, Sookkyung Lim3
1Millennium Institute for Integrative Biology (iBio), Santiago, Chile.
The EMBO journal
|April 16, 2024
概括
研究人员重新连接了一个昼夜钟,创建了一个半合成版本. 这个新的时钟保留了核心功能,同时增加了新的功能,证明了生物定时机制的灵活性.
科学领域:
- 时间生物学 时间生物学
- 分子生物学分子生物学
- 系统生物学 系统生物学
背景情况:
- 循环时钟通过一个保存的转录-翻译-负反循环 (TTFL) 调节每天的生物节奏.
- 进化保护表明,这种TTFL架构可能对时钟功能至关重要.
研究的目的:
- 调查保存的TTFL是否是功能性昼夜钟的唯一机制.
- 通过人工重新布线来探索替代时钟设计.
主要方法:
- 采用了转录性重新连接方法来设计一个半合成的昼夜钟.
- 从昼夜输出路径到核心振荡器中采用了调节器.
主要成果:
- 开发了一种半合成时钟,表现出核心昼夜特征 (周期,相位,温度补偿).
- 工程时钟显示了新的属性,包括在夜晚结束时"开灯定时器"逻辑固定阶段.
- 通过转录和后翻译机制证明了昼夜性质的差异调节.
结论:
- 规范的TTFL并不是功能性昼夜时钟的唯一架构.
- 转录的重新连接可以创建新的昼夜时钟特性.
- 循环周期,阶段和温度补偿被转录和转译后钟表方面明显控制.
更多相关视频
10:38Monitoring Cell-autonomous Circadian Clock Rhythms of Gene Expression Using Luciferase Bioluminescence Reporters
Published on: September 27, 2012
22.4K
07:44In Vivo Monitoring of Circadian Clock Gene Expression in the Mouse Suprachiasmatic Nucleus Using Fluorescence Reporters
Published on: July 4, 2018
8.3K
相关概念视频
Circadian Rhythms and Gene Regulation
4.0K
The biological clock is involved in many aspects of regulating complex physiology in all animals. It was in 1935 when German zoologists, Hans Kalmus and Erwin Bünning, discovered the existence of circadian rhythm in Drosophila melanogaster. However, the internal molecular mechanisms behind the circadian clock remained a mystery until 1984, when Jeffrey C. Hall, Michael Rosbash, and Michael W. Young discovered the expression of the Per gene oscillating over a 24-hour cycle. In subsequent...
4.0K
Biological Clocks and Seasonal Responses
34.6K
The circadian—or biological—clock is an intrinsic, timekeeping, molecular mechanism that allows plants to coordinate physiological activities over 24-hour cycles called circadian rhythms. Photoperiodism is a collective term for the biological responses of plants to variations in the relative lengths of dark and light periods. The period of light-exposure is called the photoperiod.
34.6K
Prokaryotic Transcriptional Activators and Repressors
21.0K
The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
Transcription of prokaryotic...
Transcription of prokaryotic...
21.0K
Epigenetic Regulation
3.0K
Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
X-chromosome...
3.0K
Bacterial Transcription
28.2K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.2K
RNA Polymerase II Accessory Proteins
9.2K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.2K
