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Updated: Jun 28, 2025

Detection of Retrotransposition Activity of Hot LINE-1s by Long-Distance Inverse PCR
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Detection of Retrotransposition Activity of Hot LINE-1s by Long-Distance Inverse PCR

Published on: July 27, 2019

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Look4LTRs:一种长端重复逆转移体检测工具,能够进行跨物种研究并发现最近嵌套的重复体

Anthony B Garza1, Emmanuelle Lerat2, Hani Z Girgis3

  • 1Bioinformatics Toolsmith Laboratory, Department of Electrical Engineering and Computer Science, Texas A &M University-Kingsville, Kingsville, Texas, USA.

Mobile DNA
|April 16, 2024
PubMed
概括

在多个相关的植物基因组中,Look4LTRs同时注释长端重复逆转移子 (LTR-逆转移子). 该工具准确地发现嵌套元素,改进了现有的LTR-逆转移子检测方法.

关键词:
生物信息学是一种生物信息学.在LTR-逆向转换中.长终端重复重复机器学习 机器学习最近化的巢穴.可转移的要素是可以转移的.

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Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
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The donor site from where the transposon is excised is either degraded or...
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Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
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