个别的转录因子调节了染色质的微运动及其远程结构
Haitham A Shaban1,2, Elias T Friman3, Cédric Deluz1
1Institute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne CH-1015, Switzerland.
概括
转录因子 (TFs) 动态改变色素组织. 激活器CDX2和抑制器SIX6影响整个核的染色质流动性和运动,影响高阶结构和基因调节.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学是一种遗传学.
- 生物物理学的生物物理.
背景情况:
- 细胞的基因表达是由动态色素结构控制的.
- 转录因子 (TFs) 调节局部染色质的可访问性,但整个核的反应仍然不清楚.
研究的目的:
- 为了研究特定的TFs (CDX2激活器,SIX6抑制器) 如何调节整个核中的染色质动态.
- 将本地TF活动与全球染色体组织和流动性联系起来.
主要方法:
- 高分辨率的扩散映射和活细胞中的密流重建.
- 基于成像的纳米尺度分析染色素和TF运动.
- Hi-C分析以评估高阶染色体结构.
主要成果:
- CDX2和SIX6都增加了整个核的染色质流动性,诱导了对立的微米级运动.
- CDX2改变了局部染色体相互作用和A/B区的分布.
- 全球染色体动态部分依赖于RNA聚合酶II活性.
结论:
- 序列特定的TFs在多个层面上影响染色质结构.
- 局部TF诱导的染色体变化会影响长距离的移动性和组织.
- 染色体动态是由TFs调节的,无论是依赖转录还是独立于转录.
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