菌体生物学:细菌群体中菌体的内外情况
Darian A Doakes1, Britt Koskella2
1Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
Current biology : CB
|April 23, 2024
概括
菌体,病毒集成到细菌DNA,可以提供好处,但也会伤害细菌. 这项研究使用数学模型和实验进化来解释这些病毒元素如何在细菌群体中存在,尽管它们存在缺点.
科学领域:
- 微生物学 微生物学
- 进化生物学 进化生物学
- 遗传学 是一个遗传学.
背景情况:
- 细菌基因组经常包含集成的病毒,称为prophages.
- 菌可以赋予细菌宿主有利的特征,例如抗生素耐药性.
- 然而,菌体也可以通过诱导细菌细胞溶解,特别是在压力下,来施加适应性成本.
研究的目的:
- 研究细菌群体中维持菌体的机制.
- 了解与导体运输相关的利益和成本之间的平衡.
- 为了确定支配菌体与宿主相互作用的进化动态.
主要方法:
- 数学建模与实验进化技术的整合.
- 模拟以预测在不同条件下的气动力学.
- 实验室实验以验证模型预测和观察进化轨迹.
主要成果:
- 菌体的维持受各种因素的复杂相互作用的影响,包括突变率和环境条件.
- 实验进化表明,即使有显著的健康成本,也可以保持prophages.
- 确定了有利于长期共存的prophages和它们的细菌宿主的特定条件.
结论:
- 前体的持久性是细菌群体中一个强大的现象,是由特定的进化压力驱动的.
- 这些发现为微生物群落的稳定性和细菌基因组的演变提供了洞察力.
- 了解菌体动力学对于医学和生物技术中的应用至关重要,例如菌体治疗.
相关概念视频
Lysogenic Cycle of Bacteriophages
62.1K
In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...
62.1K
Lytic Cycle of Bacteriophages
70.6K
Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the...
70.6K
Genomic DNA in Prokaryotes
43.8K
The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
Genomic Diversity in Bacteria
Although bacterial genomes are much...
Genomic Diversity in Bacteria
Although bacterial genomes are much...
43.8K
CRISPR and crRNAs
17.0K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
17.0K
Prokaryotic Cells
34.9K
Prokaryotes are small unicellular organisms that include the domains — Archaea and Bacteria. Bacteria include many common microorganisms, such as Salmonella and E. coli, while the Archaea include extremophiles that live in harsh environments, such as volcanic springs.
Like eukaryotic cells, all prokaryotic cells are surrounded by a plasma membrane, have genetic material in the form of single, circular DNA, a cytoplasm that fills the interior of the cell, and ribosomes that synthesize...
Like eukaryotic cells, all prokaryotic cells are surrounded by a plasma membrane, have genetic material in the form of single, circular DNA, a cytoplasm that fills the interior of the cell, and ribosomes that synthesize...
34.9K
Defense Against Bacterial Pathogens
1.4K
The human immune system is a complex network of cells, tissues, and organs that work together to defend the body against bacterial infections. It consists of various immune cells, each playing a specific role in the defense mechanism.
Phagocytes
Phagocytes are the frontline soldiers of the immune system. They include neutrophils and macrophages. Neutrophils are the most abundant type of white blood cell and are quickly mobilized to the site of infection. Macrophages are larger cells that patrol...
Phagocytes
Phagocytes are the frontline soldiers of the immune system. They include neutrophils and macrophages. Neutrophils are the most abundant type of white blood cell and are quickly mobilized to the site of infection. Macrophages are larger cells that patrol...
1.4K


