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MMSyn:一种新的多模式深度学习框架,用于增强对协同药物组合的预测
Yu Pang1, Yihao Chen1, Mujie Lin1
1Joint International Research Laboratory of Synthetic Biology and Medicine, Ministry of Education, Guangdong Provincial Key Laboratory of Fermentation and Enzyme Engineering, Guangdong Provincial Engineering and Technology Research Center of Biopharmaceuticals, School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.
预测协同作用的药物组合对于癌症治疗至关重要. 一个新的多式联络深度学习 (DL) 框架,MMSyn,有效地识别有效的药物组合,优于现有的方法.
科学领域:
- 在瘤学瘤学.
- 计算生物学 计算生物学
- 药理学 药理学是指药理学的学科.
背景情况:
- 组合疗法为有效的癌症治疗提供了一个有希望的策略.
- 在体外对协同药物组合进行查是艰苦而昂贵的,因为可能性众多.
- 深度学习 (DL) 提供了一种可行的计算方法,用于预测协同药物组合,利用高通量查数据.
研究的目的:
- 提出和评估一个多式联络深度学习框架,MMSyn,用于预测协同作用的药物组合.
- 为了证明MMSyn在识别癌症治疗中强效药物组合中的有效性.
主要方法:
- MMSyn将药物的分子特征 (结构,指纹,字符串编码) 与癌细胞系数据 (基因表达,DNA拷贝数,途径活性) 集成在一起.
- 功能通过注意力机制和交互模块来处理和集成.
- 多层感知子用于最终预测药物协同作用.
主要成果:
- 在药物组合预测方面,MMSyn显著超过了五种最先进的DL方法和三种传统的机器学习模型.
- 该模型在药物组合和细胞系数据集的分层交叉验证中表现出卓越的性能.
- 废弃实验证实了MMSyn框架内各组件的有效性.
结论:
- MMSyn是一种强大而有效的工具,用于预测协同作用的药物组合.
- 多式联络方法提高了药物协同效应预测的准确性和可靠性.
- MMSyn有可能加速发现用于癌症治疗的新型组合疗法.
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