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Chromosome Structure02:40

Chromosome Structure

22.7K
A functional eukaryotic chromosome must contain three elements: a centromere, telomeres, and numerous origins of replication.
The centromere is a DNA sequence that links sister chromatids. This is also where kinetochores, protein complexes to which spindle microtubules attach, are constructed after the chromosome is replicated. The kinetochores allow the spindle microtubules to move the chromosomes within the cell during cell division.
Telomeres consist of non-coding repetitive nucleotide...
22.7K
The DNA Replication Fork01:02

The DNA Replication Fork

35.9K
An organism’s genome needs to be duplicated in an efficient and error-free manner for its growth and survival. The replication fork is a Y-shaped active region where two strands of DNA are separated and replicated continuously. The coupling of DNA unzipping and complementary strand synthesis is a characteristic feature of a replication fork.   Organisms with small circular DNA, such as E. coli, often have a single origin of replication; therefore, they have only two replication...
35.9K
Chromosome Replication02:31

Chromosome Replication

8.7K
Before a cell can divide, it must accurately replicate all of its chromosomes, including the DNA and its associated histone and non-histone proteins.  This process begins at numerous origins of replication during the S phase of the cell cycle in each of a cell’s chromosomes simultaneously. Certain nucleotides can act as origins of replication, but these sequences are not well defined - especially in complex, multi-cellular, eukaryotic species. The length of DNA that spans an origin...
8.7K
Replication in Prokaryotes02:35

Replication in Prokaryotes

87.0K
Overview
87.0K
Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

11.2K
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
11.2K
DNA as a Genetic Template02:05

DNA as a Genetic Template

6.8K
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相关实验视频

Updated: Jun 27, 2025

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
09:32

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules

Published on: April 12, 2019

6.4K

旋转:一个命令行程序旋转圆形DNA序列,从给定的位置或字符串开始.

Richard Durbin1, Bianca De Sanctis1, Moritz Blumer1

  • 1Department of Genetics, University of Cambridge, Cambridge, England, CB2 3EH, UK.

Wellcome open research
|April 29, 2024
PubMed
概括

本研究介绍了"rotate",一个免费的开源工具,用于线性化和旋转圆形DNA序列. 它有效地准备基因组数据用于下游分析,如对齐,克服现有软件的局限性.

科学领域:

  • 生物信息学是一种生物信息学.
  • 计算生物学 计算生物学
  • 基因组学就是基因组学.

背景情况:

  • 在细菌,病毒和塑体中常见的圆形DNA分子,需要线性化和旋转来进行下游分析.
  • 现有的序列操纵软件往往有局限性,包括限制输入大小,缺乏自定义选项或商业许可.

研究的目的:

  • 介绍"rotate",一个新的,开源的命令行程序,用于高效的序列操作.
  • 为提供一个灵活的工具,用于线性化和旋转循环DNA序列到一个共同的起始位置.

主要方法:

  • 开发了"旋转"作为一个独立的C程序,没有外部依赖.
  • 实现了用于将序列旋转到具有指定不匹配的自定义字符串的功能.
  • 启用了对应序列的偏移到所需位置.

主要成果:

  • "旋转"成功地线性化并将循环DNA序列旋转到指定的起点.
  • 该程序的效率很高,可以显示输入大小的线性缩放.
  • 在几秒钟内展示了超过一千个线粒体序列的快速处理.

结论:

  • "rotate"为准备生物信息学分析的循环DNA序列提供了一个快速,灵活和可访问的解决方案.
关键词:
遗传学 遗传学 是一个生物信息学是一种生物信息学.圆形的 DNA 圆形的 DNA这是线粒体DNA的DNA.塑性DNA 塑性DNA 是一种

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  • 该工具克服了现有软件的局限性,支持自定义字符串和自定义偏移.
  • 通过确保标准化的序列导向,方便下游分析,例如序列对齐.