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相关概念视频

Genomic DNA in Eukaryotes00:58

Genomic DNA in Eukaryotes

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Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
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Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
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The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
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A eukaryotic cell can have up to three different types of genetic systems: nuclear, mitochondrial, and chloroplast. During evolution, organelles have exported many genes to the nucleus; this transfer is still ongoing in some plant species. Approximately 18% of the Arabidopsis thaliana nuclear genome is thought to be derived from the chloroplast’s cyanobacterial ancestor, and around 75% of the yeast genome derived from the mitochondria’s bacterial ancestor. This export has occurred...
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Genie:第一个开源的ISO/IEC编码器,用于基因组数据.

Fabian Müntefering1, Yeremia Gunawan Adhisantoso2, Shubham Chandak3

  • 1Institut für Informationsverarbeitung (TNT), Leibniz University Hannover, Appelstraße 9a, Hannover, 30167, Germany. muenteferi@tnt.uni-hannover.de.

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此摘要是机器生成的。

Genie是MPEG-G标准基因组数据压缩的第一个开源编码器. 它实现了最先进的压缩比率,确保互操作性和长期数据可持续性.

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科学领域:

  • 生物信息学是一种生物信息学.
  • 数据压缩数据压缩
  • 基因组数据分析 基因组数据分析

背景情况:

  • 在过去的二十年中,基因组数据的生产迅速增加.
  • 2019年,MPEG-G标准 (ISO/IEC) 发布,以解决有效的基因组数据处理问题.
  • 缺乏开源实现,阻碍了标准的科学评估和采用.

研究的目的:

  • 介绍Genie,MPEG-G标准的第一个开源编码器.
  • 展示Genie在有效和可互操作地压缩基因组数据方面的能力.
  • 通过可访问的实施来促进MPEG-G标准的更广泛采用.

主要方法:

  • 开发Genie作为一个开源的MPEG-G兼容编码器.
  • 对Genie的压缩比率与现有方法的评估.
  • 与符合标准的解码器进行互操作性测试.

主要成果:

  • 精灵实现了基因组数据的最先进的压缩比.
  • Genie确保与任何独立于制造商的标准合规解码器的互操作性.
  • 通过参考解码器,ISO/IEC生态系统保证了数据的长期可持续性和解码性.

结论:

  • Genie为MPEG-G标准的实施提供了一个关键的开源工具.
  • Genie的可用性有助于MPEG-G的科学验证和采用.
  • Genie为不断增长的基因组数据集的高效和可互操作的管理做出了贡献.