氨酸特异性希斯脱甲-1 (LSD1) 的抗癌药物显示核细胞基质的可变抑制
Dulmi Senanayaka1, Danyun Zeng1, Emre Deniz2
1Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53233. United States.
Biochemistry
|May 14, 2024
概括
准确的方法对于开发氨酸特异性去甲基-1 (LSD1) 抑制剂至关重要. 这项研究揭示SP-2577不是LSD1抑制剂,强调需要直接测试相关基质.
科学领域:
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 分子生物学分子生物学
- 药理学 药理学是指药理学的学科.
背景情况:
- 氨酸特异性去甲基酶-1 (LSD1) 是一种关键的表观遗传调节剂,也是癌症治疗的标.
- 开发有效的LSD1抑制剂需要精确的方法来评估脱甲基化,效力和选择性.
- 现有的测定可能不准确地反映一个抑制剂的真正作用机制.
研究的目的:
- 为了比较可逆和不可逆LSD1抑制剂在和核酶基质上的抑制动力学.
- 评估药物效力,体外抑制和基于细胞的效果,使用西方斑点测试.
- 确定目前用于表观遗传标的药物查方法中的潜在陷.
主要方法:
- 使用H3K4me2和核酶基质的酶抑制试验.
- 可逆性 (CC-90011,SP-2577) 和不可逆性 (ORY-1001,基胺) 抑制剂的比较.
- 细胞活力研究和对Ewing肉瘤细胞中H3K4me2水平的西方斑点分析.
主要成果:
- 通过结合测试,SP-2577证明了对基质的抑制,但未能抑制核体上的LSD1活性或影响细胞中的H3K4me2水平.
- 直接的西方斑点测试显示SP-2577不是LSD1酶抑制剂.
- 该研究强调了间接合测定和直接酶活性测量之间的差异.
结论:
- 尽管它具有细胞毒性作用,但SP-2577的作用机制可能独立于LSD1脱甲基化.
- 生理学上相关的基质和直接测试对于准确的表观遗传药物开发至关重要.
- 这项研究为设计选择性LSD1抑制剂提供了关键的见解,并验证了强大的测试方法.
相关概念视频
Histone Modification
13.3K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.3K
Epigenetic Regulation
3.0K
Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
X-chromosome...
3.0K
Spreading of Chromatin Modifications
8.3K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
Writers
The writer...
8.3K
Histone Variants at the Centromere
4.3K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
4.3K
Nucleosome Remodeling
9.1K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
9.1K
The Nucleosome Core Particle
909
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
909


