普洛瓦索利菌 (Pycnococcus provasolii) 的基因组序列 (CCAP190/2) (吉拉德,1991年) 是一个非常重要的例子
David H Green1, Cecilia Rad-Menéndez1, Christine Campbell1
1Culture Collection of Algae and Protozoa, The Scottish Association for Marine Science, Oban, Scotland, UK.
Wellcome open research
|May 29, 2024
概括
我们向您展示了一种海洋绿藻 *Pycnococcus provasolii* 的基因组组合. 这些基本的基因组数据为藻类生物学和进化提供了洞察力.
科学领域:
- 海洋生物学 海洋生物学
- 基因组学就是基因组学.
- 物理学的生理学
背景情况:
- *Pycnococcus provasolii*是一种属于Pseudoscourfieldiales的海洋绿藻.
- 了解海洋藻的基因组对于生态和进化研究至关重要.
研究的目的:
- 为了生成一个高质量的基因组组合 *Pycnococcus provasolii*.
- 为未来的海洋绿藻研究提供基因组资源.
主要方法:
- 全基因组测序和组装.
- 核基因组的架构成伪分子.
- 线粒体和塑体基因组的组合.
主要成果:
- 产生了32.2兆基的基因组组合.
- 该组件高度连续,有99.67%的基架构成44种染色体伪分子.
- 线粒体 (24.3千基) 和塑体 (80.2千基) 基因组也被组装在一起.
结论:
- *Pycnococcus provasolii*的基因组组合代表了藻类基因组学的一个重大进步.
- 这个资源将促进比较基因组学和研究藻类适应和进化.
相关概念视频
Genomic DNA in Prokaryotes
43.8K
The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
Genomic Diversity in Bacteria
Although bacterial genomes are much...
Genomic Diversity in Bacteria
Although bacterial genomes are much...
43.8K
Genomic DNA in Eukaryotes
46.8K
Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
46.8K
Prokaryotic Cells
34.8K
Prokaryotes are small unicellular organisms that include the domains — Archaea and Bacteria. Bacteria include many common microorganisms, such as Salmonella and E. coli, while the Archaea include extremophiles that live in harsh environments, such as volcanic springs.
Like eukaryotic cells, all prokaryotic cells are surrounded by a plasma membrane, have genetic material in the form of single, circular DNA, a cytoplasm that fills the interior of the cell, and ribosomes that synthesize...
Like eukaryotic cells, all prokaryotic cells are surrounded by a plasma membrane, have genetic material in the form of single, circular DNA, a cytoplasm that fills the interior of the cell, and ribosomes that synthesize...
34.8K
Next-generation Sequencing
88.7K
The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
88.7K
Sanger Sequencing
754.1K
DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
754.1K
RACE - Rapid Amplification of cDNA Ends
6.3K
Rapid Amplification of cDNA Ends, or RACE, is one of the most effective methods to obtain a full-length cDNA from an mRNA sequence between a known internal region to the unknown sequence at the 5’ or 3’ end. The unknown region is cloned in the cDNA by a gene-specific primer that binds the known end, and a hybrid primer that attaches a predefined anchor sequence to the unknown end of the cDNA. The sequence in between is amplified by PCR with an anchor primer and a gene-specific...
6.3K


